bims-cediti Biomed News
on Cell death in innate immunity, inflammation, and tissue repair
Issue of 2026–09–13
23 papers selected by
Kateryna Shkarina, Universität Bonn



  1. Biochem Soc Trans. 2026 Sep 23. 54(9): 1223-1237
      Inflammatory caspases play essential roles in regulating IL-1 cytokine processing and secretion, as well as in inducing pyroptosis as part of the innate immune response to pathogens and other noxious stimuli. While the activation of caspase-1 is controlled by dedicated pattern recognition receptors, human caspase-4 and caspase-5, and murine caspase-11 function themselves as direct sensors for lipopolysaccharide (LPS), the immunostimulatory component of the Gram-negative bacterial outer membrane. These caspases bind LPS through their N-terminal caspase recruitment domain (CARD), which triggers their oligomerization and activation. Recent studies have provided new insights into the molecular basis of LPS recognition by the caspase-4/11 CARD, including its interactions with LPS and other lipid ligands, the evolutionary origins of inflammatory caspases, the structural organization of LPS-caspase complexes, and the regulatory mechanisms that govern CARD-ligand association. In this review, we summarize these advances and discuss their implications for inflammatory caspase activation and innate immune signaling.
    Keywords:  caspase-4; host-pathogen interactions; inflammasome; innate immunity; lipopolysaccharides; membrane
    DOI:  https://doi.org/10.1042/BST20260715
  2. Elife. 2026 Sep 11. pii: RP110919. [Epub ahead of print]15
      Nerve injury-induced protein 1 (NINJ1), a cell adhesion molecule, is oligomerized during lytic cell death and mediates plasma membrane rupture to release large intracellular molecules that propagate the inflammatory response. We and others previously showed that NINJ2, a close relative of NINJ1, does not promote plasma membrane rupture to spread inflammation. Here, we identify that NINJ2 is necessary for lysosome membrane integrity to protect cells from ferroptosis. Specifically, we found that NINJ2 localizes to lysosomes and interacts with LAMP1, an anchor glycoprotein of the lysosome membranes and a sensor of stressed lysosomes. We also found that loss of NINJ2 exacerbates lysosomal membrane permeabilization (LMP), which allows for selective leakage of lysosomal contents, such as labile iron, into the cytosol. Accordingly, loss of NINJ2 elevates cellular labile iron accumulation and decreases expression of ferritins, the primary intracellular iron storage protein complexes. Mechanistically, we found that loss of NINJ2 promotes ferritin FTH degradation in lysosomes, which can be reversed by knockdown of LAMP1. Moreover, we found that loss of NINJ2 sensitizes cells to ferroptosis induced by RSL3 and Erastin, consistent with a recent study that loss of NINJ2 predisposes mice to chronic inflammation. Together, these findings uncover a previously unrecognized activity of NINJ2 from lysosome homeostasis to ferroptosis, which can be explored as a cancer therapeutic strategy, especially considering that NINJ2 and ferritins are found to be overexpressed and positively associated with iron-addicted cancers.
    Keywords:  Lamp1; NINJ2; cancer biology; ferritin; ferroptosis; human; lysosomal membrane permeabilities
    DOI:  https://doi.org/10.7554/eLife.110919
  3. J Biol Chem. 2026 Sep 11. pii: S0021-9258(26)02419-1. [Epub ahead of print] 113547
      Interleukin (IL)-1β is a leaderless inflammatory cytokine that is not secreted via the classical endoplasmic reticulum-Golgi pathway. Instead, m(ature) IL-1β secretion is classically associated with pyroptosis, a caspase-dependent inflammatory cell death mediated by gasdermin D (GSDMD) pore formation at the plasma membrane. However, human monocytes can secrete mIL-1β in the absence of cell death, and the contribution of GSDMD in this secretory pathway remains poorly defined. Here, we distinguished two pathways for mIL-1β secretion in living human monocytic cells : a rapid, GSDMD-dependent pathway and a slower, GSDMD-independent pathway. Using a genome-wide CRISPR-Cas9 screen, we identified XPR1 (Xenotropic and Polytropic retrovirus Receptor 1) as a regulator of the GSDMD-independent pathway. XPR1, the only phosphate exporter identified in metazoans, has not previously been implicated in cytokine secretion. Genetic invalidation of XPR1 in GSDMD-deficient monocytic cells markedly reduced IL-1β secretion. We further showed that this regulatory function requires XPR1 surface expression and phosphate export activity. These findings reveal an unexpected link between phosphate homeostasis and non-lytic mIL-1β secretion, opening new opportunities to modulate IL-1β-driven inflammatory diseases.
    Keywords:  IL-1β secretion; XPR1; gasdermin D; human monocytic cells; inflammation
    DOI:  https://doi.org/10.1016/j.jbc.2026.113547
  4. J Exp Med. 2026 Oct 05. pii: e20260373. [Epub ahead of print]223(10):
      The activation of caspase-1 requires assembly of the ASC speck to control inflammatory responses and pyroptosis. However, the recruitment of caspase-1 into the ASC speck for activation remains unclear. Here, we identified the ATPase Vps4B as a central component of the inflammasome that endogenously interacts with ASC and caspase-1, contributing to the activation of NLRP3 and AIM2 inflammasomes. Mechanistically, the polymerization of NLRP3 and ASC triggers intracellular Ca2+ signaling, which recruits Vps4B to the ASC speck. Vps4B forms a ring-like structure encircling the ASC filament and catalyzes the disassembly and liberation of the used caspase-1 CARD domain. This process enables replenishment and renewal of the newly unoccupied ASC speck, facilitating continuous caspase-1 recruitment and activation, thereby contributing to host defense against Listeria dissemination and the maintenance of blood-brain barrier integrity in vivo. Our study identifies a self-rejuvenating inflammasome process that opens up new avenues for therapeutic intervention in inflammatory diseases.
    DOI:  https://doi.org/10.1084/jem.20260373
  5. Cell Chem Biol. 2026 Sep 09. pii: S2451-9456(26)00320-X. [Epub ahead of print]
      The non-canonical inflammasome is a protein complex involved in bacterial infections, and its activation leads to excessive inflammatory responses during sepsis. The precise regulation of the non-canonical inflammasome in the body remains unclear. Here, we found that some chemicals that chelate zinc ions positively regulated the activation of the non-canonical inflammasome. These chemicals acted by inhibiting the activity of dipeptidyl peptidase 3 (DPP3). DPP3 cleaved phosphatidylethanolamine binding protein 1 (PEBP1) to generate an N-terminal fragment, which could bind to caspase-4/11 and inhibit the response intensity of the non-canonical inflammasome. PEBP1 N terminus appeared in the serum of mice and patients with sepsis. DPP3-deficient mice exhibited stronger inflammatory cytokine responses and had poor survival in the LPS-induced sepsis model. Promoting the activity of DPP3 effectively constrained the response intensity of sepsis in mice and increased their survival. Our findings provide a perspective for understanding the molecular regulatory process of the non-canonical inflammasome in sepsis.
    Keywords:  DPP3; PEBP1; caspase-4/11; non-canonical inflammasome; sepsis
    DOI:  https://doi.org/10.1016/j.chembiol.2026.08.010
  6. EMBO Rep. 2026 Sep 07.
      Excessive inflammasome activation is increasingly recognized as a critical driver of pathology during bacterial infections, yet the pathogen-derived mechanisms that trigger dysregulated inflammasome responses remain poorly defined. Here, we identify a previously unrecognized role for the serine/threonine kinase Aurora A in promoting inflammasome activation during Staphylococcus aureus infection. We demonstrate that S. aureus activates JNK-dependent signaling in macrophages, leading to the phosphorylation of Aurora A. Activated Aurora A directly phosphorylates ASC, the inflammasome adaptor, on serine residues, enhancing ASC oligomerization and facilitating robust caspase-1 activation through both NLRP3 and AIM2 inflammasomes. This phosphorylation event stabilizes ASC speck formation and amplifies downstream IL-1β production, thereby intensifying inflammatory responses. Importantly, pharmacological inhibition or genetic disruption of Aurora A markedly suppresses inflammasome activation in vitro and in vivo, significantly reduces bacterial burdens and improves survival in mice infected with antibiotic-resistant S. aureus. These findings reveal Aurora A as a key host regulator exploited by S. aureus to potentiate inflammasome-driven inflammation and highlight inflammasome inhibition as a potential therapeutic strategy that augments host defense independently of antibiotic resistance.
    DOI:  https://doi.org/10.1038/s44319-026-00918-x
  7. J Inflamm Res. 2026 ;19 629930
      Lytic cell death has long been regarded as an irreversible process culminating in plasma membrane rupture. However, accumulating evidence indicates that the activation of lytic pathways does not invariably result in cell lysis. Instead, cells can undergo sublethal membrane damage, a state in which membrane injury is limited, allowing cells to remain viable while triggering persistent inflammation, barrier dysfunction and other functional alterations. This potentially reversible state may provide a therapeutic window in which limiting membrane rupture or enhancing membrane repair could preserve viable but compromised cells. This review focuses on the three major forms of lytic cell death: pyroptosis, necroptosis, and ferroptosis. We summarize the canonical molecular mechanisms, processes of membrane injury, regulatory pathways, and consequences of sublethal membrane damage. Furthermore, we discuss the shared features and biological impacts of sublethal membrane damage. Given the heterogeneous responses in sepsis, sublethal membrane damage may provide a relevant framework for understanding sepsis pathophysiology. A deeper understanding of this intermediate state may offer novel strategies for sepsis that aim not only to prevent complete cell lysis but also to modulate the function of viable but compromised cells.
    Keywords:  ferroptosis; lytic cell death; necroptosis; pyroptosis; sepsis; sublethal membrane damage
    DOI:  https://doi.org/10.2147/JIR.S629930
  8. Nat Struct Mol Biol. 2026 Sep 08.
      Inflammasomes ignite innate immune defense in response to infectious pathogens and noninfectious dangers, primarily through sensors composed of nucleotide-binding domain (NBD), leucine-rich repeat (LRR)-containing (NLR) family proteins. NLRP6 is an inflammasome sensor that plays critical roles in regulating intestinal inflammation, and its overactivation is linked to autoinflammatory diseases such as inflammatory bowel disease. However, how NLRP6 is maintained in an inhibited structure is unknown. Here we report two cryogenic-electron microscopy structures of human NLRP6 monomer in the adenosine-5'-triphosphate (ATP)/NBD-bound (twisted conformation) and unbound (extended conformation) states. The ATP-binding event connects and compacts the NACHT subdomains and the LRR domain, thus maintaining NLRP6 in an inhibitory conformation. NBD interacts directly with helical domain 1, winged-helix domain and helical domain 2, further contributing to the autoinhibition. Disruption of ATP binding and NBD interactions unleashes the NLRP6 inflammasome activation in the cellular study. The structural comparison between twisted and extended conformations reveals that the rearrangement of an NLRP6-specific acidic loop modulates NLRP6 activity. Although ATP-binding of NLRP6 and MCC950 (a potent NLRP3 inhibitor)-binding of NLRP3 share a similar interaction location in the structures, MCC950 does not inhibit NLRP6 in cells. Together, our data reveal the ATP-mediated cooperative inhibition mechanism of NLRP6 and provide insight into the therapeutic intervention of NLRP6-related autoinflammatory disorders.
    DOI:  https://doi.org/10.1038/s41594-026-01878-5
  9. Metabolism. 2026 Sep 06. pii: S0026-0495(26)00279-9. [Epub ahead of print]184 156766
       BACKGROUND: High-fat diets activate intestinal inflammasomes, promoting dysbiosis, metabolic dysfunction, and inflammation. The apoptosis speck-like protein with a caspase activation domain (ASC) is a key adaptor for inflammasome activation, but its role in diet-induced metabolic alterations remains unclear.
    METHODS: We investigated the metabolic and inflammatory consequences of ASC deficiency using Pycard-/- mice fed a high-fat diet. Body weight, glucose tolerance, intestinal and hepatic metabolic profiles, and inflammatory markers were assessed. To evaluate extracellular ASC function, ASC oligomers were administered to Pycard-/- mice.
    RESULTS: ASC-deficient mice displayed reduced weight gain and improved glucose tolerance compared with wild-type controls. Pycard-/- mice also showed enhanced intestinal and hepatic metabolic profiles and decreased inflammation. Extracellular administration of ASC oligomers partially restored dysbiosis, intestinal metabolic changes, and inflammatory responses in Pycard-/- mice.
    CONCLUSIONS: ASC contributes to metabolic dysregulation through both its canonical intracellular role in inflammasome activation and an extracellular oligomer-mediated mechanism. These findings identify ASC as a relevant target for interventions aimed at improving obesity-associated metabolic and inflammatory disturbances.
    Keywords:  ASC; Glucose tolerance; High-fat-diet; Inflammasome; Metabolism; Microbiota
    DOI:  https://doi.org/10.1016/j.metabol.2026.156766
  10. Proc Natl Acad Sci U S A. 2026 Sep 15. 123(37): e2620112123
      Sterile alpha and Toll/interleukin-1 receptor motif-containing protein 1 (SARM1) is a NAD+-consuming enzyme that drives axon degeneration and is activated by changes in the NMN/NAD+ ratio. A recent study proposed that cytosolic double-stranded DNA (dsDNA) directly binds SARM1's TIR domain, activating it independently of this canonical mechanism. Here, we evaluate dsDNA-dependent SARM1 activation using purified SARM1, biochemical and biophysical assays, primary neurons, and cellular pharmacology. Across multiple platforms, dsDNA does not stimulate SARM1 NADase activity, promote higher-order assembly, or generate the metabolic signature of activated SARM1. When effects are observed, they are weak, context-dependent, and inconsistent across assays, and do not support a defined activation mechanism. In cells, dsDNA induces NAD+ depletion through PARP-dependent pathways independently of SARM1. The reported DNA-binding mutant (3KE-SARM1) is nonfunctional in canonical SARM1 activation paradigms such as axotomy and therefore cannot be used to infer dsDNA activation mechanisms. Together, these findings do not support a model in which SARM1 is directly activated by dsDNA.
    Keywords:  DNA; NADase; SARM1; axon degeneration; neurodegeneration
    DOI:  https://doi.org/10.1073/pnas.2620112123
  11. Front Physiol. 2026 ;17 1907325
      Mitochondria function not only as metabolic and bioenergetic centers but also as critical signaling hubs that integrate cellular context with innate immune response. The mitochondrial antiviral-signaling protein (MAVS), anchored to the outer mitochondrial membrane, is a central adaptor in the RIG-I-like receptor (RLR) pathway, orchestrating type I interferon (IFN) production and apoptosis. Although long regarded as a docking platform for RLR-derived signals, recent advances, particularly concerning its diverse post-translational modifications (PTMs), reveal MAVS as a dynamic integrator that decodes cellular stress and metabolic cues to fine-tune antiviral immunity. Canonical PTMs such as ubiquitination and phosphorylation highlight the importance of precisely controlling both the initiation and downregulation of MAVS signaling, but recent discoveries substantially broaden this regulatory landscape. Stress-responsive phosphorylation mediated via the ASK1-p38 MAPK pathway enhances MAVS signaling capacity under oxidative and ER stress, linking cellular damage to amplified interferon production. In parallel, a newly identified vitamin K-dependent carboxylation of MAVS reshapes downstream signaling by promoting interferon induction while restraining apoptosis, introducing a regulatory layer that may reflect the metabolic context surrounding GGCX activity, including vitamin K availability. Understanding this multilayered regulatory network not only redefines MAVS as a stress-sensitive mitochondrial signaling hub responsive to cellular context but also highlights new avenues for therapeutic modulation of innate immunity and cell fate during viral infection. This review summarizes emerging insights into PTM-mediated regulation of MAVS and outlines their broader implications for mitochondrial antiviral signaling.
    Keywords:  MAVS; apoptosis; cellular stress; innate immunity; mitochondria; post-translational modifications (PTM); type I interferon (IFN-I)
    DOI:  https://doi.org/10.3389/fphys.2026.1907325
  12. Biomater Res. 2026 ;30 0403
      The NLRP3 inflammasome is a key regulator of inflammatory responses and is increasingly recognized as an important mediator of pathological reactions to diverse chemical, biological, and microenvironmental stimuli. However, most currently available approaches primarily detect downstream or end-stage events, limiting real-time analysis of the early molecular processes that precede inflammasome assembly. Here, we report NEKfla, a genetically encoded Förster resonance energy transfer (FRET)-based biosensor designed to monitor early NEK7-NLRP3-associated signaling in living cells with single-cell spatiotemporal resolution. NEKfla was engineered using full-length NEK7 and NLRP3 linked to a ECFP-YPet FRET pair, and a ΔLRR control sensor was generated to assess interaction-dependent responses. In live-cell and in vitro analyses, NEKfla detected stimulus-dependent increases in FRET in response to lipopolysaccharide and nigericin, responded to pharmacological inhibition by MCC950 and licochalcone B, and visualized dynamic changes associated with NLRP3 oligomerization. The biosensor also functioned in multiple cellular contexts, including macrophage-like cells, and detected signaling changes earlier than a caspase-1 reporter. Together, these findings establish NEKfla as a live-cell platform for tracking proximal inflammasome activation events and support its potential utility in mechanistic studies and cell-based screening of materials or compounds that modulate early NLRP3 inflammasome signaling.
    DOI:  https://doi.org/10.34133/bmr.0403
  13. Nat Immunol. 2026 Sep 09.
      How mammals mount an effective immune response against infectious agents remains unresolved. Here we identify microbial adhesion to myeloid cells as a critical initiating event that precedes pattern recognition receptor (PRR) engagement. Using a skin infection model with pathogenic bacteria and fungi, we demonstrate that neutrophil recruitment occurs in two sequential phases. The early phase is PRR-independent and instead driven by microbial adhesion, which engages the mechanosensitive ion channel Piezo1 to promote leukotriene (LT)B4 production. Together with interleukin-1α, LTB4 induces CXCL1 release, triggering neutrophil infiltration via the same circuit at play during sterile inflammation. By contrast, the late phase is toll-like receptor (TLR)- and CXCL2-dependent, marking a transition to the canonical, pathogen-driven response. Our findings uncover microbial adhesion as a previously unrecognized danger signal that activates innate immunity via mechanotransduction, revealing a paradigm of how immune responses to infection are initiated.
    DOI:  https://doi.org/10.1038/s41590-026-02643-y
  14. Nat Immunol. 2026 Sep 09.
      Nod-like receptor family pyrin domain-containing 3 (NLRP3) is activated by many stimuli, and its dysfunction is involved in various inflammatory diseases. Activation of NLRP3 is thought to happen via a multistep process involving phase separation, conformational opening and oligomerization. However, how NLRP3 is released from its autorepressed conformation remains elusive. Here we report that activating molecule in Beclin1-regulated autophagy protein 1 (AMBRA1), previously known for its role in autophagy, bound NLRP3 to scaffold and allosterically activate NLRP3. AMBRA1 engaged the leucine-rich repeat and helical domain 2 subdomains of NLRP3 through its β-propeller domain and destabilized the closed, inactive conformation of NLRP3, facilitating adenosine triphosphate binding and transition of NLRP3 to the active state. AMBRA1 deficiency in monocytes or macrophages impaired NLRP3 activation and reduced inflammatory responses in mouse models of endotoxic shock, colitis and sepsis. Nanobodies blocking the interaction between AMBRA1 and NLRP3 inhibited NLRP3 activation, underscoring the therapeutic potential of targeting this interaction. Our study revealed the role of AMBRA1 in NLRP3 inflammasome assembly and activation, offering potential pharmacological targets for related diseases.
    DOI:  https://doi.org/10.1038/s41590-026-02644-x
  15. iScience. 2026 Sep 18. 29(9): 117306
      Antimicrobial peptides (AMPs) are key components of barrier immunity and are traditionally attributed to epithelial cells and granulocytes. Here, we report human β-defensin 124 (DEFB124) as a previously uncharacterized AMP predominantly produced by dermal stromal cells. Transcriptomic analyses across independent therapeutic cohorts showed consistent induction of DEFB124 during the restoration of skin homeostasis in atopic dermatitis (AD). Spatial transcriptomics, qPCR, and protein analyses localized DEFB124 expression to dermal fibroblasts and adipocytes. The murine ortholog β-defensin 25 (Defb25) showed a similar stromal expression pattern, was induced following intradermal Staphylococcus aureus (S. aureus) challenge, and was suppressed by type 2 cytokines through IL-4 receptor signaling. Recombinant DEFB124 showed dose-dependent antimicrobial activity in vitro and reduced bacterial burden in vivo, whereas Defb25 mRNA knockdown impaired fibroblast antimicrobial capacity and exacerbated S. aureus infection. These findings expand the known repertoire of cutaneous β-defensins and reveal stromal cells as an important source of cutaneous antimicrobial defense.
    Keywords:  S. aureus; antimicrobial peptides; atopic dermatitis; defensins; fibroblasts; infection; innate immunity; phototherapy; stromal cells
    DOI:  https://doi.org/10.1016/j.isci.2026.117306
  16. Cell Rep. 2026 Sep 08. pii: S2211-1247(26)00993-9. [Epub ahead of print]45(9): 117915
      Chronic, non-healing wounds are sustained by Staphylococcus aureus biofilms, yet how biofilm reprograms the immune cells tasked with resolving injury has remained unclear. We show that biofilm-derived soluble cues, not bacterial contact, generate a previously undescribed biofilm-associated macrophage (BAM) subset marked by high Macrophage receptor with collagenous structure (MARCO) and suppressed MERTK, which recognizes apoptotic cells but fails to engulf them. Using isogenic S. aureus USA300 variants of graded biofilm capacity, only high biofilm-conditioned medium elicited this state in human macrophages; MARCO neutralization restored corpse clearance. Mechanistically, biofilm factors drove phospho-C/EBPβ into the nucleus to repress MERTK, severing sensing from engulfment. Single-cell and Xenium spatial transcriptomics, with cytometry by time of flight (CyTOF) and PhenoCycler, localized BAMs to biofilm-proximal niches as a hybrid CD64+CD163+ state outside M1/M2 categories, populating 60%-80% of infected chronic wounds. In vivo, myeloid-restricted MARCO overexpression by tissue nanotransfection recapitulated impaired efferocytosis and persistent inflammation, nominating MARCOhiMERTKlo macrophages as a druggable checkpoint in biofilm-associated disease.
    Keywords:  CP: microbiology; MARCO; MERTK; Staphylococcus aureus; biofilm; chronic wounds; efferocytosis; inflammation; macrophage
    DOI:  https://doi.org/10.1016/j.celrep.2026.117915
  17. PLoS Pathog. 2026 Sep 09. 22(9): e1014598
      Macrophages play multifaceted and critical roles in controlling diverse pathogenic infections. Building on our recently published observations of macrophages exhibiting memory responses to HSV-1 infection, our current report investigates the macrophage subtype responsible for generating trained immunity against virus-induced immunopathogenesis. Using ATAC-seq (Assay for Transposase-Accessible Chromatin using sequencing), an epigenetic profiling technique, we identified chromatin accessibility changes in both M1 and M2 macrophages associated with the acquisition of IRGM1, a marker of the trained phenotype. To conduct this study, we first generated M0, M1, and M2 macrophage subtypes from bone marrow (BM) derived macrophages isolated from HSV-1 latently infected wild type (WT) mice. ATAC-seq revealed that M1-generated macrophages displayed higher IRGM1-associated chromatin accessibility peaks compared to M2 and M0 subtypes, and this response was enhanced after stimulation with UV-inactivated virus. To further dissect this response, we analyzed memory responses in bone marrow-derived macrophages, spleen macrophages, corneal macrophages, and trigeminal ganglia (TG) of latently infected M1 and M2 macrophages. Flow cytometry and ATAC-seq data showed a significantly higher proportion of IRGM1 ⁺ macrophages in infected M2-/- mice, which are enriched in M1 macrophages. These findings indicate that M1 macrophages, but not M2 macrophages, undergo trained immunity in response to HSV-1 infection. This is also confirmed by the Luminex assay, in which M1 macrophages, after stimulation, then known as primed M1 macrophages, enhance the secretion of pro-inflammatory cytokine/chemokine response to secondary HSV-1 exposure. These results uncover a previously underappreciated role for macrophage-mediated trained immunity in antiviral defense against HSV-1 infection and offer new insights into potential therapeutic targets for modulating host immune responses during HSV-1 infection.
    DOI:  https://doi.org/10.1371/journal.ppat.1014598
  18. Eur J Immunol. 2026 Sep;56(9): e70276
      Enveloped viruses possess a membrane composed of a complex mixture of host-derived lipids, glycolipids, and viral glycoproteins, which play a critical role in host-virus interactions. Viral glycoproteins can be detected by a range of immune lectins, thereby modulating and sometimes subverting the host immune responses to promote immune evasion. Whether viral lipids can directly interact with pattern recognition receptors to modulate antiviral immune responses remains unclear. In this study, we report recognition of the human cytomegalovirus (HCMV) viral envelope by the C-type lectin Mincle. Unlike previously described interactions between human lectins and viruses, Mincle recognition of HCMV and the concomitant activation of the prototypical downstream signaling pathway are mediated by host cell-derived lipids and glycolipids incorporated into the viral envelope. Using mass spectrometry, we identify multiple previously described ligands of Mincle in the HCMV viral envelope, including cholesterol and globosides. We show that Mincle recognition of HCMV viral particles, as well as pure cholesterol, induces proinflammatory cytokine production in primary human macrophages. Collectively, these findings demonstrate that Mincle recognition of the HCMV lipid envelope constitutes a novel pattern recognition mechanism that may apply to other enveloped viruses.
    Keywords:  biology; cell biology; glycolipid; human cytomegalovirus; immune system; lectin; pattern recognition receptor; signal transduction; viral envelope; virology
    DOI:  https://doi.org/10.1002/eji.70276
  19. Nat Rev Nephrol. 2026 Sep 10.
      Acute kidney injury (AKI) is a major risk factor for the subsequent development and progression of chronic kidney disease (CKD), particularly when kidney repair is incomplete or maladaptive. The repair trajectory after kidney injury is primarily determined through the interconnected responses of tubular epithelial cells (TECs), immune cells and fibroblasts. Within this network, TECs act as sentinels of tissue injury and initiators of the repair cascade. After AKI, TECs can undergo regulated cell death programs, whereas surviving cells adopt divergent states that either support regeneration or promote maladaptive repair. In successful repair, surviving TECs proliferate, expand and restore tubular integrity. By contrast, failed repair is characterized by persistent cell-cycle arrest, cellular senescence and the secretion of pro-inflammatory and pro-fibrotic mediators. The signals that are released by injured and maladaptively repaired tubules consequently shape the recruitment and activation of immune cells, which can mediate tissue regeneration or perpetuate inflammation and fibroblast activation. Ultimately, aberrant TEC and immune-cell activation converges in the sustained activation of fibroblasts and the deposition of excess extracellular matrix via cellular crosstalk - the common final pathway of maladaptive repair - which drives the progression of AKI to CKD over time.
    DOI:  https://doi.org/10.1038/s41581-026-01115-8
  20. J Biol Chem. 2026 Sep 07. pii: S0021-9258(26)02391-4. [Epub ahead of print] 113519
      During an immune response, metabolism changes dramatically. Metabolites are oxidized to power immune cell functions, serve as building blocks for proliferation, and act as effectors to regulate pathogen or host cells. Though metabolic changes in cultured cells have been studied extensively, metabolism changes in vivo are less understood. Here, we measured metabolomic changes across six mouse tissues in three models of immune activation: CpG-DNA cytokine storm, lymphocytic choriomeningitis virus infection, and polyI:C viral mimetic injection; and carried out metabolomics in cultured macrophages activated with different stimuli. We found most metabolomic changes were exclusive to either inflamed tissues or cultured macrophages, although itaconate was strongly induced in both contexts. We then mechanistically dissected the role of the soluble sialic acid N-glycolylneuraminic acid, which is highly induced in inflamed tissues yet only modestly in cultured macrophages. This metabolite increases in tissues in different models of inflammation, and the analogous human metabolite, N-acetylneuraminic acid, rises in human patients experiencing inflammation. We found that N-glycolylneuraminic acid is produced in CD11b+ myeloid cells by cleavage of protein-bound sialic acid. However, blocking its production did not affect CpG-DNA liver inflammation or LCMV infection in mice. Therefore, these experiments identify soluble sialic acid as a conserved biomarker of inflammation in mice and humans and highlight the differences in metabolism between in vitro and in vivo models of inflammation.
    Keywords:  inflammation; isotopic tracer; macrophage; metabolism; metabolomics; sialic acid
    DOI:  https://doi.org/10.1016/j.jbc.2026.113519
  21. Sci Adv. 2026 Sep 11. 12(37): eaeg7872
      Herpesviruses are common pathogens of the oral cavity, yet how they interact with other oral microbes are poorly understood. Using murine gamma-herpesvirus 68 (MHV68) as a model for human gamma-herpesviruses, we find that ISGylation is hijacked to facilitate viral capsid assembly and lytic replication. Coinfection with the oral Aggregatibacter actinomycetemcomitans (A.actinomycetemcomitans) and MHV68 synergistically induced interferon-stimulated gene 15 (ISG15) expression and global ISGylation. Proteomic profiling revealed viral structural proteins as the dominant targets of ISGylation in MHV68-infected cells. Genetic ablation of ISGylation, using ISGylation-resistant recombinant MHV68 and ISG15-deficient mouse embryonic fibroblasts (MEFs), demonstrated that ISGylation of the major capsid protein ORF25 is required for efficient capsid assembly and maturation into the infectious C-type virions. Notably, introduction of a de novo ISGylation site into the ISGylation-resistant MHV68 was sufficient to restore ISGylation, capsid assembly, and virion maturation. Consistent with these findings, A. actinomycetemcomitans failed to enhance MHV68 lytic replication in ISG15-deficient MEFs. Extending this mechanism to representative herpesviruses, we showed that ISGylation of major capsid proteins is broadly required for efficient lytic replication. Together, these findings uncover a previously unrecognized strategy by which herpesviruses exploit an ISG15 innate immune effector, amplified by microbial coinfection, to promote virion assembly and productive infection.
    DOI:  https://doi.org/10.1126/sciadv.aeg7872
  22. iScience. 2026 Sep 18. 29(9): 117335
      Neurodegeneration involves the entangled processes of cell-autonomous and non-cell-autonomous neuronal cell death, which leads to a collapse in the integrity of the neural network and causes behavioral symptoms. Here, we demonstrate that aberrant cell cycle re-entry (CCR) is prominent in mature neurons and that the replication fork acts as a target site for long interspersed nuclear element-1 (L1) retrotransposition during neurodegeneration. The fatal susceptibility of S-phase neurons in 5xFAD mice is attributed to a DNA repair deficiency in response to L1-mediated replication stress. Impaired sirtuin 6 expression seems to allow stochastic L1 activation and enhanced retrotransposition. Reduced estrogen/prolactin signaling correlates well with reduced Brca1 expression that is thought to protect neurons from replication stress. Importantly, L1-mediated pathogenesis correlates well with conventional Alzheimer's disease pathology. In summary, the combination of enhanced L1 retrotransposition and DNA repair deficiency elicited synthetic lethality in S-phase neurons, highlighting a previously unknown pathogenic mechanism of neurodegeneration.
    Keywords:  Alzheimer’s disease; Brca1; LINE-1; cell cycle; mouse model; neurodegeneration; neuronal cell death; replication stress; retrotransposition; synthetic lethality
    DOI:  https://doi.org/10.1016/j.isci.2026.117335