bims-fibdiv Biomed News
on Fibroblast diversity
Issue of 2026–01–11
24 papers selected by
Emilio Ernesto Méndez Olivos, University of Calgary



  1. Front Cell Dev Biol. 2025 ;13 1681875
      The extracellular matrix (ECM) is essential for tissue homeostasis, ensuring structural stability, facilitating cell-cell communication, and tightly controlling key cellular processes, including proliferation, differentiation, and migration. Numerous cell types and signalling cascades direct ECM turnover; chief among them, the phosphatidyl-inositol-3-kinase (PI3K)/AKT (protein kinase B, PKB) axis remains intensively studied in fibroblasts. Recent evidence indicates that the integration of extracellular cues with intracellular mediators in fibroblasts can modulate the impact of the PI3K/AKT pathway on the ECM. This process is intricately linked to critical fibroblast functions such as metabolic reprogramming, autophagy, apoptosis, and stress responses, ultimately shaping outcomes in fibrotic diseases, wound healing, tissue remodelling, and pathological scar formation. Whereas conventional reviews centre on site-restricted subsets in single disorders, we integrate multi-tissue insights to chart PI3K/AKT signalling across heterogeneous fibroblast populations, taxonomising their sources into a unifying framework that confronts heterogeneity and accelerates precision therapeutic design.
    Keywords:  PI3K/AKT; cell therapy; extracellular matrix; fibroblast; targeted therapy
    DOI:  https://doi.org/10.3389/fcell.2025.1681875
  2. J Invest Dermatol. 2026 Jan 05. pii: S0022-202X(25)03638-3. [Epub ahead of print]
      Fibroblasts have traditionally been regarded as structural cells responsible for extracellular matrix (ECM) synthesis and remodeling during skin homeostasis and repair. However, emerging research has redefined fibroblasts as dynamic, immunomodulatory cells that play pivotal roles in inflammation, fibrosis, and tumor progression. This review synthesizes current understanding of skin fibroblast heterogeneity, plasticity, and diverse functions across a spectrum of inflammatory skin diseases, including autoimmune, allergic, fibrotic, and neoplastic pathologies. Fibroblasts in these contexts adopt disease-specific phenotypes shaped by their local cellular, signaling, and biomechanical cues and prominently by their crosstalk with immune and epithelial cells. Fast-paced advances in single-cell and spatial transcriptomics have uncovered heterogenous fibroblast subsets with specialized roles in immune regulation, ECM remodeling, and signaling niche-dependent functions. Moreover, fibroblasts have emerged as key drivers of chronic disease persistence and contributors to therapeutic resistance. Despite these advances, knowledge gaps remain regarding lineage identity, functional plasticity, and phenotype-driving gene regulatory networks for cutaneous fibroblasts. Continued investigation into fibroblast biology will be essential for translating newly emerging insights into precision therapies and for redefining treatment strategies across inflammatory and fibrotic skin disorders.
    Keywords:  Extracellular matrix; Fibroblast heterogeneity; Immune regulation; Inflammatory skin disease; Skin fibroblasts
    DOI:  https://doi.org/10.1016/j.jid.2025.12.002
  3. Int J Mol Sci. 2025 Dec 30. pii: 382. [Epub ahead of print]27(1):
      Dupuytren's disease (DD) is a chronic fibroproliferative disorder of the palmar fascia, leading to disabling digital contractures and high recurrence after surgery. This narrative review highlights DD as a multifactorial condition in which genetic predisposition and cytogenetic instability converge with extracellular matrix remodeling, aberrant transforming growth factor β (TGF-β) and Wnt/β-catenin signaling, cytoskeletal stabilization and immune-inflammatory amplification. Epigenetic dysregulation further locks fibroblasts into a persistent myofibroblast state. Discrepancies between studies are largely explained by disease stage and experimental anti-inflammatory, antifibrotic and epigenetic strategies to achieve durable disease modification.
    Keywords:  Dupuytren’s disease; epigenetics; extracellular matrix; fibrosis; myofibroblast; palmar fascia; transforming growth factor β
    DOI:  https://doi.org/10.3390/ijms27010382
  4. Oncol Res. 2025 ;34(1): 18
       Objectives: High-grade serous ovarian cancer (HGSOC), the most common subtype of epithelial ovarian cancer (EOC), exhibits a mesenchymal phenotype characterized by fibrotic stroma and poor prognosis. Human epididymis protein 4 (HE4), a key diagnostic biomarker for ovarian cancer, is involved in fibrotic processes in several non-malignant diseases. Given the clinical significance of stromal fibrosis in HGSOC and the potential link between HE4 and fibrosis, this study aimed to investigate the role of HE4 in the formation of stromal fibrosis in HGSOC.
    Methods: A total of 126 patients with gynecological conditions were included and divided into normal, benign, and EOC groups. Tissue stiffness was quantitatively measured and analyzed for its correlation with clinicopathological features. We further investigated the correlation between tumor stiffness and the expression levels of HE4 and fibroblast activation markers (α-smooth muscle actin (α-SMA) and fibroblast activation protein (FAP)) in tumor tissues from 22 HGSOC patients. In vitro, primary fibroblasts were treated with recombinant HE4 (rHE4) or conditioned media from HE4-knockdown ovarian cancer cells to assess fibroblasts activation and matrix contractility (Collagen gel contraction assays). In vivo, a subcutaneous xenograft model using HE4-knockdown cells was established to evaluate the effects of HE4 suppression on tumor growth and extensive extracellular matrix (ECM) remodeling.
    Results: Ovarian cancer tissues showed significantly increased stiffness compared to benign/normal groups, showing positive correlation with serum HE4 levels. High-stiffness HGSOC tumors exhibited upregulated expression of HE4, α-SMA, FAP, and collagen I. rHE4 stimulated fibroblast activation and enhanced matrix contractility, whereas HE4 knockdown in cancer cells abrogated these pro-fibrotic effects. In vivo, HE4-silenced xenografts displayed restricted tumor growth accompanied by reduced stromal expression of α-SMA, FAP, and collagen I.
    Conclusion: Our findings suggest that HE4 may facilitate ECM remodeling in HGSOC through promoting fibroblast activation and increasing collagen deposition.
    Keywords:  Ovarian cancer; extensive extracellular matrix (ECM); fibroblast; human epididymis protein 4 (HE4); α-smooth muscle actin (α-SMA)
    DOI:  https://doi.org/10.32604/or.2025.069007
  5. Diabetes Metab Syndr Obes. 2025 ;18 4913-4929
       Introduction: Diabetic nephropathy (DN) is a leading cause of end-stage kidney disease (ESKD), with renal fibrosis as a key pathological hallmark. However, the cellular and molecular drivers of fibrosis remain incompletely defined. Here, we employed single-cell RNA sequencing (scRNA-seq) to delineate pro-fibrotic cell subsets and their key regulatory factors in human DN kidneys, providing a higher-resolution view compared to previous fibrosis-related scRNA-seq studies.
    Methods: Publicly available scRNA-seq datasets from human DN and control kidneys were analyzed to identify fibrosis-associated fibroblast subsets. A Tmsb10-high fibroblast population was prioritized. Functional validation was performed through Tmsb10 knockdown in NIH-3T3 fibroblasts and in a diabetic mouse model, followed by assessment of fibrosis markers, extracellular matrix (ECM) deposition, and TGF-β/SMAD signaling.
    Results: scRNA-seq revealed a significant expansion of Tmsb10-high fibroblasts in DN kidneys, exhibiting strong enrichment of ECM-related and TGF-β/SMAD-responsive genes. Tmsb10 knockdown reduced Fn1, Col1a1, and α-Sma expression by approximately 50-70% and markedly attenuated ECM accumulation in vivo. Mechanistically, TMSB10 deficiency suppressed phosphorylation of SMAD2/3, mitigating fibroblast activation and matrix deposition.
    Discussion: This study identifies TMSB10 as a novel fibroblast-specific regulator of renal fibrosis in DN, acting through the TGF-β/SMAD pathway. These findings expand current understanding of fibroblast heterogeneity and highlight TMSB10 as a potential therapeutic target for DN and other fibrotic diseases. Limitations include validation in a limited sample size and the use of murine fibroblast models, warranting further confirmation in human primary cells.
    Keywords:  TGF/SMAD signaling pathway; diabetic nephropathy (DN); renal fibrosis; single-cell RNA sequencing (scRNA-seq); thymosin beta-10 (TMSB10)
    DOI:  https://doi.org/10.2147/DMSO.S559695
  6. Int J Mol Sci. 2025 Dec 19. pii: 12. [Epub ahead of print]27(1):
      Glaucoma is a group of progressive optic neuropathies and the leading cause of irreversible vision loss worldwide. It is a chronic eye disease, and its major pathological features include fibrosis of the trabecular meshwork, Schlemm's Canal and lamina cribrosa. Central to fibrosis is extracellular matrix (ECM) remodelling and metabolic reprogramming. Glutaminolysis is an alternative energy pathway that has previously been shown to be implicated in the metabolic reprogramming associated with cancer and other fibrotic diseases, facilitating ECM remodelling and cell proliferation. This paper reviews fibrosis, glutaminolysis in the setting of fibrosis, and fibrosis and glutaminolysis in the context of glaucoma. We review the evidence for fibrosis and metabolic reprogramming in oncology and systemic fibrotic diseases, which reveals a predilection for glutaminolysis. We review the current therapies that exist to target these pathways, and find glutaminolysis to be a potential target for future therapies in glaucoma.
    Keywords:  bioenergetics; fibrosis; glaucoma; glutaminolysis
    DOI:  https://doi.org/10.3390/ijms27010012
  7. Stem Cell Res Ther. 2026 Jan 05.
       BACKGROUND: Pulmonary arterial hypertension (PAH) is a fatal condition characterized by progressive vascular remodeling in the pulmonary arteries, eventually leading to right heart failure and death. Dysregulated extracellular matrix (ECM) remodeling is central to PAH pathogenesis and represents a potential therapeutic target. Mesenchymal stromal cells (MSCs) have shown promise in preclinical studies; however, the optimal therapeutic window, dosing frequency, and mechanistic basis for their regulation of vascular ECM remain unclear.
    METHODS: We employed a monocrotaline (MCT)-induced rat model of PAH to evaluate different MSC treatment regimens, including early administration (day 1 post-MCT), delayed administration (days 7 and 14), and repeated dosing (days 1 and 11). Additionally, we combined in vivo and in vitro approaches to investigate how MSCs modulate the activation of pulmonary arterial adventitial fibroblasts (PAAFs) and influence ECM remodeling.
    RESULTS: Biodistribution studies indicated that MSC retention in lung tissue peaked within 24 h and gradually declined by day 21. A single early dose of MSCs (on day 1) significantly ameliorated PAH progression, increasing the 28-day survival rate, reducing right ventricular systolic pressure (RVSP), improving right ventricular function, and attenuating small pulmonary vascular remodeling, including reductions in medial thickening, excessive muscularization, and collagen deposition. Repeated MSC administration did not provide additive therapeutic benefit. Both in animal models and cell cultures, MSCs effectively suppressed PAAF activation and reduced ECM protein production. This anti-fibrotic effect was mediated, at least in part, via the pathway involving the upregulation of SOCS3 and consequent inhibition of STAT3 phosphorylation.
    CONCLUSION: Our findings underscore the importance of early intervention in the PAH disease course for MSC-based therapy. MSCs attenuate vascular remodeling and disease progression, possibly through the SOCS3/STAT3 signaling pathway, by targeting PAAF activation and ECM dysregulation. These results offer a novel mechanistic foundation for MSC treatment in PAH.
    Keywords:  Extracellular matrix; Fibroblasts; Mesenchymal stromal cells; Pulmonary arterial hypertension; SOCS3/STAT3 pathway
    DOI:  https://doi.org/10.1186/s13287-025-04883-5
  8. Front Biosci (Landmark Ed). 2025 Dec 18. 30(12): 47450
       OBJECTIVE: This integrated study aimed to characterize fibroblast heterogeneity in diabetic ulcers and evaluate the efficacy of platelet-rich plasma (PRP) using multi-omics approaches.
    METHODS: We analyzed single-cell RNA sequencing (scRNA-seq) data (GSE165816) from healed (n = 9) and non-healed (n = 5) patients with diabetic foot ulcers (DFU) to characterize fibroblast dynamics, utilizing cell-cell communication analysis, transcription factor profiling, and pseudotime trajectory reconstruction. A streptozotocin-induced diabetic ulcer rat model was established to validate the therapeutic effects of PRP.
    RESULTS: scRNA-seq identified 13 cell types, with fibroblasts showing the most significant proportional increase in healed DFU (32% versus 25% in non-healed tissue). Fibroblast-centric communication networks revealed synergistic interactions with endothelial and keratinocyte lineages. Three key transcription factors (PLAGL1, RUNX2, and ZKSCAN7) were upregulated in healed fibroblasts, regulating pathways related to extracellular matrix (ECM) synthesis, angiogenesis, and cell migration. Pseudotemporal analysis confirmed the differentiation of fibroblasts toward ECM-producing states, with enrichment of platelet-derived growth factor (PDGF) signaling pathways. In the rat model, PRP treatment resulted in epidermal/dermal thickening, reduced inflammatory infiltration, and transcriptomic reprogramming that converged with non-diabetic profiles. Venn analysis identified a 26-core gene signature (e.g., COL1A1, FN1) associated with fibroblast-mediated ECM reorganization.
    CONCLUSION: Fibroblasts drive diabetic ulcer healing via transcription factor-regulated functional networks. PRP accelerates tissue repair by modulating fibroblast ECM-related gene expression, with the 26-gene signature providing a promising foundation for novel diagnostic and therapeutic targets.
    Keywords:  RNA sequencing; diabetic foot; extracellular matrix; fibroblasts; platelet-rich plasma; single-cell analysis; transcription factors; wound healing
    DOI:  https://doi.org/10.31083/FBL47450
  9. Toxicol Appl Pharmacol. 2026 Jan 02. pii: S0041-008X(25)00475-2. [Epub ahead of print]507 117699
      Impaired wound healing represents a major complication of diabetes, yet effective therapeutic options remain limited. Our research group has developed a salidroside derivative, SHPL-49, which exhibits antioxidant, anti-inflammatory, and pro-angiogenic properties. We hypothesized that SHPL-49 may promote diabetic wound healing through the modulation of macrophage-mediated immune responses and fibroblast activity. In vivo studies revealed that SHPL-49 significantly accelerated wound closure in diabetic mice, with enhanced granulation tissue formation and extracellular matrix (ECM) deposition. Mechanistically, SHPL-49 induced M2 polarization of wound-associated macrophages, which subsequently secreted TGF-β1 to activate the TGF-β1/Smad2/3 pathway in fibroblasts. In vitro experiments further confirmed that SHPL-49 directly promoted M2 polarization in RAW 264.7 macrophages, as evidenced by increased CD206 expression and TGF-β1 secretion. The conditioned medium from SHPL-49-activated macrophages promoted Smad2/3 phosphorylation in L929 fibroblasts, thereby stimulating their proliferation, migration, and upregulating the expression of collagen I/III, α-SMA, and TGFβRI. Collectively, our findings suggest that SHPL-49 is a promising therapeutic candidate for diabetic wound healing, functioning through a macrophage-to-fibroblast signaling axis: it polarizes macrophages toward an M2 phenotype, which subsequently release TGF-β1 to enhance fibroblast function via the Smad2/3 signaling pathway. This study establishes a theoretical foundation for the future exploration and development of novel therapeutic indications for SHPL-49.
    Keywords:  Diabetes; Fibroblast; Macrophage; TGF-β1; Wound Healing
    DOI:  https://doi.org/10.1016/j.taap.2025.117699
  10. Nat Rev Immunol. 2026 Jan 07.
      The extracellular matrix (ECM) constitutes the bulk between cells, establishes barriers that separate tissue compartments, and defines the form and pliability of organs. The ECM is an integral part of the cellular microenvironment, conveying a multitude of biochemical (and mechanical) signals to associated cells, for example, by binding cytokines and chemotactic factors. All cells are in contact with the ECM, including immune cells in lymphoid organs and when they extravasate from blood vessels, as well as tissue-resident myeloid cells in close contact with the ECM of blood vessels. The past decade has seen technical advances in proteomics and transcriptomics that have provided large volumes of data on the diversity of the ECM and of the immune system. It is important to assess this rapidly growing body of data together with knowledge of the in vivo situation, particularly from more than a decade of intravital imaging studies. This Review summarizes both biochemical and imaging data that are relevant to leukocyte extravasation across the ECM - in particular, the basement membrane - to enter sites of inflammation, as well as the changes to the ECM that are associated with chronic inflammation, including tumour sites. It also discusses how this information may be exploited for the development of novel immunotherapies.
    DOI:  https://doi.org/10.1038/s41577-025-01248-0
  11. Biophys J. 2026 Jan 02. pii: S0006-3495(25)03504-0. [Epub ahead of print]
      Focal adhesions play critical roles in a variety of cellular behaviors and physiological processes, including cell migration, proliferation, wound healing, and tumor invasion. While focal adhesions are recognized as key protein signaling and mechanosensory hubs that mediate interactions between the cell and the extracellular matrix (ECM), the mechanisms by which cells sense and respond to ECM geometry at the subcellular level, and how these cues are translated into cell-scale behaviors, remain unclear. In this study, we develop a computational cell model to investigate the effects of adhesion pattern of 2D substrate on cell morphology and migration. The model has several advancements over existing approaches, including the incorporation of cellular viscoelasticity, dynamic cell-substrate communication, and a mechano-chemical feedback loop between cell adhesion and protrusion. The simulation results are directly compared with the experimental data and show remarkable agreement. Based on both simulations and validated experiments involving cells on substrate with directional patterns under Y-27632 and sh-βPix treatments, we propose that line tension along the cell boundary, driven by contractility, plays a dominant role in driving directed cell migration. Additionally, focal adhesion-mediated protrusion through chemical signaling supplement to maintain the migration directionality. These findings provide useful insights into the underlying mechanism of the effects of cell-ECM regulated mechano-chemical interactions on cell morphology and migration.
    DOI:  https://doi.org/10.1016/j.bpj.2025.12.026
  12. Curr Biol. 2026 Jan 08. pii: S0960-9822(25)01620-3. [Epub ahead of print]
      Tissues and organs grow to a characteristic final size during animal development. A hallmark of tissues reaching their final size is the cessation of cell-cycle progression. However, the mechanisms by which cell-cycle progression is halted in tissues reaching their final size remain largely unknown. Here, we show that the extracellular matrix (ECM) is necessary and sufficient to halt cell-cycle progression at G2 phase in Drosophila late-larval-stage wing discs reaching their final size. Depleting ECM in late-larval-stage wing discs leads to nuclear accumulation of the co-transcriptional activator Yorkie (YAP and TAZ in mammals) and to a Yorkie-dependent release of cells from G2-phase arrest. Conversely, increasing ECM thickness induces precocious G2-phase accumulation, which is overcome by expression of an activated form of Yorkie. Furthermore, we show that programmed ECM degradation is necessary for the normal resumption of cell-cycle progression during later pupal stages and for proper adult wing size. Our work identifies a critical role for ECM in restraining cell-cycle progression in tissues reaching their final size and reveals ECM-mediated nuclear exclusion of Yorkie as a key mechanism.
    Keywords:  Drosophila; FUCCI; Yorkie; basement membrane; cell-cycle progression; extracellular matrix; tissue size; wing disc
    DOI:  https://doi.org/10.1016/j.cub.2025.11.079
  13. Cells. 2026 Jan 01. pii: 74. [Epub ahead of print]15(1):
      (1) Background: Wound healing is a highly coordinated process encompassing hemostasis, inflammation, angiogenesis, keratinocyte migration, collagen deposition, and extracellular matrix remodeling. Successful repair also requires adequate nutrient and oxygen delivery through a well-developed vascular supply. Disruption of these processes can occur through aberrations in diverse biological pathways, including extracellular matrix organization, cellular adhesions, angiogenesis, and immune regulation. (2) Methods: We reviewed mechanisms of impaired tissue repair in monogenic disorders by focusing on three categories-connective tissue, hematological/immunological, and aging-related disorders-to illustrate how single-gene defects disrupt inflammation, cellular proliferation, and matrix remodeling. Additionally, we reviewed various polygenic disorders-chronic kidney disease, diabetes mellitus, hypertension, and obesity-to contrast complex multifactorial pathologies with single-gene defects. (3) Results: This review establishes that genetic impediments, despite their distinct etiologies, monogenic and polygenic disorders share critical downstream failures in the wound healing cascade. While monogenic diseases illustrate direct causal links between specific protein deficits and repair failure, polygenic diseases demonstrate how multifactorial stressors overwhelm the body's regenerative capacity. (4) Conclusions: This review synthesizes current evidence on both monogenic diseases and polygenic contributions to impaired wound healing. These findings highlight that genetic susceptibility is a decisive factor in the ability to restore tissue homeostasis. This underscores the profound impact of genetic background on the efficacy of hemostasis, inflammation, and remodeling.
    Keywords:  Ehlers-Danlos syndrome; diabetes mellitus; epidermolysis bullosa; hemophilia; leukocyte adhesion deficiency; monogenic disease; obesity; polygenic disease; sickle cell disease; wound healing
    DOI:  https://doi.org/10.3390/cells15010074
  14. Am J Obstet Gynecol. 2026 Jan;pii: S0002-9378(25)00664-7. [Epub ahead of print]233(6S): S645-S661.e1
       BACKGROUND: Placenta accreta spectrum is a severe obstetric complication associated with uterine scarring, particularly from prior cesarean births. Despite its considerable clinical sequalae, the underlying mechanisms remain unclear. Recent evidence suggests that abnormal extracellular matrix remodeling plays a pivotal role in placenta accreta spectrum pathology.
    OBJECTIVE: This study investigates collagen architecture and its role in placenta accreta spectrum adherence using multimodal imaging, an in vivo mouse model, and an in vitro co-culture system, aiming to identify pathophysiology of placenta accreta spectrum with implications for improved uterine repair and placenta accreta spectrum prevention.
    STUDY DESIGN: Human placenta accreta spectrum and nonplacenta accreta spectrum specimens were analyzed using nonlinear label-free optical imaging techniques to characterize collagen architecture at the decidual-placental interface (total n=23, placenta accreta spectrum=13). A surgical mouse model of placenta accreta spectrum was used to examine collagen organization and placental adherence patterns. Additionally, an in vitro "accreta-in-a-dish" model was developed using decidualized human uterine fibroblasts, trophoblasts, and macrophages to assess extracellular matrix remodeling, wound healing, and inflammatory interactions. Live-cell imaging and electric cell-substrate impedance sensing quantified the impact of collagen deposition and inflammation on scar resistance to electric impedance and trophoblast behavior.
    RESULTS: Disorganized fibrillar collagen deposition with disrupted border integrity was a hallmark of placenta accreta spectrum pathology, specifically at the site of adherent, compared to nonadherent placenta accreta spectrum controls in human surgical specimens. The mouse model of placenta accreta spectrum confirmed matrix disorganization at the site of abnormal placental adherence. In vitro, collagen coating enhanced wound healing, while placental-conditioned media from placenta accreta spectrum sites impaired macrophage-driven tissue repair. In vitro, trophoblasts preferentially avoided extracellular matrix-rich regions, suggesting a role for matrix composition in placental attachment and invasion. Macrophage-mediated inflammation further compromised scar resistance, indicating an inflammatory-matrix interplay that may predispose to placenta accreta spectrum.
    CONCLUSION: These findings underscore the role of extracellular matrix dysregulation in placenta accreta spectrum, highlighting collagen architecture as a critical determinant of placental adherence. Collagen modulation and targeted inflammatory interventions could improve uterine scar healing and reduce placenta accreta spectrum incidence. Future research should focus on translating these mechanistic insights into diagnostic and therapeutic strategies for placenta accreta spectrum prevention and management.
    DOI:  https://doi.org/10.1016/j.ajog.2025.08.094
  15. Curr Opin Cell Biol. 2026 Jan 07. pii: S0955-0674(25)00149-8. [Epub ahead of print]98 102611
      The progression from healthy tissue to malignancy involves a critical precancerous stage marked by cellular lesions with aberrant molecular and phenotypic characteristics. The fate of these lesions is shaped not only by cell-intrinsic alterations but also by the precancerous microenvironment (PME), an ecosystem of epithelial, stromal and immune cells embedded within the extracellular matrix. Focusing on epithelial precancers, this review first defines the metastable state and signalling networks that distinguish precancer from homeostasis and cancer. It then examines the models and technologies used to investigate PME signalling across spatial-temporal dimensions, followed by an integrated overview of how PME components collectively shape lesion trajectories. Finally, it outlines the outstanding questions and research priorities needed to advance mechanistic insight and realise the translational potential of PME-targeted interventions.
    DOI:  https://doi.org/10.1016/j.ceb.2025.102611
  16. J Biomed Sci. 2026 Jan 06. 33(1): 8
      The extracellular matrix (ECM) provides critical biochemical and biophysical cues that regulate cell behavior in health and disease. Collagens dominate in abundance and structural importance, shaping tissue-specific ECM signatures that guide cellular behavior. Two major and distinct transmembrane receptor families, integrins and discoidin domain receptors (DDRs), serve as primary sensors for collagens, yet they employ fundamentally distinct binding mechanisms and signaling kinetics. While both can activate shared downstream pathways, their functional interplay remains complex and context-dependent, with the potential to fine-tune cellular responses to ECM cues. This review deciphers the nuanced crosstalk between integrin β1 and DDRs, with a particular focus on the understudied DDR2, across physiological and pathological processes. We discuss how this interplay, which evolves from cooperative to compensatory or even antagonistic signaling, is influenced by variables,  such as tissue specificity, developmental timing, and pathological context, dictating cell adhesion, migration, and ECM remodeling. Key examples include DDRs acting as allosteric regulators to license integrin activation, their partnership in mechanotransduction during development, and their divergent roles in aging tissues, where altered collagen mechanics shift the receptor hierarchy. In pathology, the DDR-integrin axis is pivotal in fibrosis and cancer, influencing fibroblast activation, drug resistance, metastatic outgrowth, and immune suppression within the tumor microenvironment. Notably, the receptors can function both independently and synergistically; for instance, DDR2 in cancer-associated fibroblasts regulates integrin-mediated mechanosignaling to promote metastasis, while in other contexts, both receptors activate distinct survival pathways. Understanding the signaling dynamics and mechanisms of these receptors is necessary for deciphering how cells interpret ECM signals and how these mechanisms contribute to disease progression, especially in those diseases marked by collagen remodeling. This comprehension is crucial for developing novel therapeutic strategies. Emerging evidence suggests that combined targeting DDRs and integrins can synergistically overcome ECM-mediated therapy resistance, enhance immune infiltration, and reprogram pathological microenvironments, offering a promising approach for treating fibrosis and collagen-rich cancers.
    Keywords:  Aging; Cancer; Collagen; Discoidin domain receptor (DDR) 1 and 2; Extracellular matrix (ECM); Fibrosis; Integrins; Targeted therapies; Tyrosine kinase receptor (TKR)
    DOI:  https://doi.org/10.1186/s12929-025-01211-0
  17. Mol Cell Biochem. 2026 Jan 09.
      Chronic kidney disease (CKD) is a global public health problem, and its prevalence and mortality are rising rapidly worldwide. At present, CKD treatment can only partially delay the progression of the disease, and it is necessary to explore safer and more effective treatment options. Renal interstitial fibrosis is a common pathological process in CKD. The essence of renal fibrosis is the excessive deposition of extracellular matrix (ECM), tubulointerstitial fibrosis and glomerulosclerosis caused by various injury reactions, which eventually leads to renal parenchymal destruction and loss of renal function. Therefore, anti-renal fibrosis therapy plays a crucial role in delaying the progression of CKD. Unfortunately, the current treatment options to reverse or prevent the progression of renal fibrosis are very limited. Under normal circumstances, proximal renal tubular epithelial cells mainly rely on fatty acid oxidation (FAO) to obtain energy. In renal tubulointerstitial fibrosis, lipid metabolism disorders occur, resulting in a large amount of lipid deposition in the kidney, causing kidney damage. It can be seen that maintaining the level of FAO metabolism is of great significance for maintaining normal renal function.Kidney is one of the key organs of lactic acid metabolism. Under normal circumstances, renal cortex is the main place of lactic acid metabolism and absorption. In the renal cortex, tubular epithelial cells are the main bearers. This process occurs primarily in the glucose-lactate circulation between the cortex and medulla of the kidney, but the ability of tubular epithelial cells to metabolize lactate is impaired under pathological conditions, especially in acute kidney injury and diabetic nephropathy, resulting in lactic acid accumulation and inflammation and mitochondrial dysfunction. Lactic acid accumulation creates new post-translational modifications-lactylation modifications, metabolic reprogramming resulting from lactylation modifications, regulation of gene transcription, protein expression, and cellular metabolism, critical in renal pathology, and lactylation plays a role in inflammatory responses such as mitochondrial dysfunction in AKD. Intervening in the lactase process in kidney disease may lead to new therapeutic strategies.
    Keywords:  Acute kidney injury (AKI); Chronic kidney disease (CKD); Lactylation; Mitochondrial dysfunction; Post-translational modification
    DOI:  https://doi.org/10.1007/s11010-025-05465-y
  18. Int J Mol Sci. 2026 Jan 05. pii: 544. [Epub ahead of print]27(1):
      The cardiac extracellular matrix (ECM) is a dynamic, tissue-specific scaffold essential for cardiovascular development, homeostasis, and disease. Once considered a passive structural framework, the ECM is now recognized as an active regulator of mechanical, electrical, and biochemical signaling in the heart. Its composition evolves from embryogenesis through adulthood, coordinating cardiomyocyte maturation, chamber formation, and postnatal remodeling. In pathological states, diverse stimuli-including ischemia, pressure or volume overload, metabolic dysfunction, and aging-disrupt ECM homeostasis, triggering fibroblast activation, myofibroblast transformation, and maladaptive collagen deposition. These processes underpin myocardial fibrosis, a key driver of impaired contractility, diastolic dysfunction, arrhythmogenesis, and heart failure across ischemic and non-ischemic cardiac diseases. ECM alterations also exhibit age- and sex-specific patterns that influence susceptibility to cardiovascular pathology. Advances in imaging and circulating biomarkers have improved fibrosis assessment, though limitations persist. Therapeutic strategies targeting ECM remodeling, including modulation of profibrotic signaling pathways, non-coding RNAs, cellular therapies, and nano-delivery systems, show promise but remain largely experimental. Collectively, expanding knowledge of ECM biology highlights its central role in cardiovascular physiology and pathology and underscores the need for targeted diagnostic and therapeutic innovations.
    Keywords:  cardiovascular disease; fibrosis; heart failure; metalloproteinase; preserved ejection fraction
    DOI:  https://doi.org/10.3390/ijms27010544
  19. Biophys J. 2026 Jan 08. pii: S0006-3495(26)00002-0. [Epub ahead of print]
      Invasion of cancer cells is often characterized by a transition in phenotype of cells or their niches from an epithelial to a mesenchymal state (EMT). Under what conditions do transitioned niches acquire greater fitness than, and outcompete, their parental un-transitioned niches, is not well-understood. Here, we use a Cellular Potts model-based multiscale computational framework to investigate this question. Inducing an EMT in a single cell at the edge of an early-growing tumor surrounded by a fibrillar extracellular matrix (ECM) allows us to temporally trace inter-niche competitions. We observe that the transitioned niche dominates the population it arises from and invades better when surrounded by dense ECM. An increase in cell-ECM adhesion by itself drives domination at 50% probability, such that the transitioned population invades faster and contributes further to collective invasion of the whole tumor. Decrease in inter- and intra-niche cell-cell adhesion by itself is not sufficient to achieve domination. However, added to high cell-ECM adhesion, loss of intra-niche (but not inter-niche adhesion) restores the probability, but not the extent, with which domination by the mesenchymally transitioned niche is achieved by attenuating its confinement by its parental population. Our simulations reveal the forces regulating such confinement and how cell-cell and cell-ECM adhesions, stochastic invasion dynamics, and ECM density contribute nuancedly to distinct aspects of inter-niche competitions within tumor populations and their fitness.
    Keywords:  Epithelial-Mesenchymal Transition (EMT); cell-ECM adhesion; collective cancer invasion (CCI); niche domination; niche fitness; tumor niche
    DOI:  https://doi.org/10.1016/j.bpj.2026.01.002
  20. Iran J Otorhinolaryngol. 2025 ;37(6): 291-302
       Introduction: Cleft lip and palate are the most common congenital craniofacial anomalies, and inadequate treatment of these defects may lead to serious psychosocial and economic consequences. Hesperidin, a flavanone extracted from citrus fruit peels, is a potent antioxidant. However, no study has yet investigated the effects of hesperidin on surgical wound healing in cleft lips. The aim of the present study was to evaluate the histological effects of hesperidin on the healing process of surgically induced cleft lip wounds in rats.
    Materials and Methods: In this in vivo study, sixteen male Wistar rats were randomly divided into four groups: the control group (normal saline), intervention group 1 (25 mg/kg hesperidin), intervention group 2 (50 mg/kg hesperidin), and intervention group 3 (100 mg/kg hesperidin). A surgical wound was created on the left upper lip of each rat and sutured in two layers. The treatments were administered for 21 days. On day 28 post-surgery, the rats were euthanized, and histopathological analyses were performed to evaluate epithelial proliferation, inflammatory cell density, neovascularization, fibroblast proliferation, and collagen deposition. The samples were stained with hematoxylin and eosin and Masson's trichrome stains. Statistical significance was set at P< 0.05.
    Results: The findings showed that the mean scores for fibroblast proliferation, collagen deposition, and inflammatory cell density were significantly higher in the placebo group compared to the 100 mg/kg hesperidin group (P= 0.006, P =0.009, and P = 0.035, respectively). Conversely, epithelial proliferation was significantly higher in the 100 mg/kg hesperidin group compared to the placebo group (P= 0.006). However, higher doses of hesperidin resulted in reduced collagen deposition and fibroblast proliferation, although these differences were not statistically significant (P> 0.05).
    Conclusion:  Administration of 100 mg/kg hesperidin decreased fibroblast proliferation, collagen deposition, and inflammatory cell density, while increasing epithelial proliferation during the healing of surgically induced cleft lip wounds in rats. These results suggest that hesperidin may modulate wound repair and contribute to reduced scar formation, which could be particularly beneficial in the aesthetic zone.
    Keywords:  Cleft Lip; Hesperidin; Histopathological Techniques; Rats; Wound Healing
    DOI:  https://doi.org/10.22038/ijorl.2025.85555.3890
  21. Sci Adv. 2026 Jan 09. 12(2): eadz0229
      The distal mouse digit tip regenerates postamputation, while the proximal digit undergoes fibrosis. This study presents a comparative single-cell RNA sequencing-based analysis of regenerating and nonregenerating digits to computationally identify fibroblast subpopulations and genes associated with fibrosis and regeneration. To test the sufficiency of identified candidate genes to alter wound healing outcomes, we developed a robust adeno-associated virus gene delivery technique for digit fibroblasts. We found that overexpression of candidate profibrotic gene Pcolce2 or Prelp in the blastema modifies normal regeneration and overexpression of candidate proregenerative factor Ccl2 or Mest in the proximal digit substantially increases bone deposition. These data demonstrate that the computational analysis combined with the AAV delivery approach presented in this study provides a powerful framework for identifying the driving factors of fibrosis and regeneration in the mammalian digit.
    DOI:  https://doi.org/10.1126/sciadv.adz0229
  22. Exp Ther Med. 2026 Feb;31(2): 59
      Pulmonary fibrosis (PF) is a fatal chronic disease characterized by progressive interstitial scarring, alveolar destruction and a persistent decline in lung function. The present study evaluated the therapeutic effects of quercetin, a natural flavonoid with potent antioxidant and anti-inflammatory properties, in animal models of PF (PROSPERO registration no. INPLASY202530122). A comprehensive literature search was performed across PubMed, Web of Science, Embase, Cochrane Library and Ovid from inception to January 2025, identifying 25 eligible preclinical studies. Data were extracted and analyzed for outcomes in three main categories: Fibrotic changes, inflammatory responses and oxidative stress parameters. Random-effects meta-analysis was employed, followed by meta-regression analysis to examine study heterogeneity. The analysis indicated that quercetin administration was associated with improvements in fibrotic indicators, showing reduced collagen deposition and improved histopathological scores. Anti-inflammatory effects were observed through modulation of cytokine levels and inflammatory cell infiltration. Additionally, quercetin demonstrated effects on oxidative stress markers, showing enhanced antioxidant capacity and reduced oxidative damage. Meta-regression analysis identified a number of moderating factors, including dosage, treatment duration, animal model selection and induction method, which contributed to heterogeneity across studies. The findings suggest that quercetin may provide beneficial effects in experimental PF models through multiple pathways. However, notable heterogeneity was observed among included studies, indicating the need for cautious interpretation of results. Further investigation with standardized protocols is recommended to validate these preliminary findings.
    Keywords:  animal models; meta-analysis; pulmonary fibrosis; quercetin; therapeutic efficacy
    DOI:  https://doi.org/10.3892/etm.2025.13054
  23. Mol Cell Biochem. 2026 Jan 09.
       OBJECTIVE: Keloids are pathological scars characterized by excessive collagen deposition that occurs during wound healing after skin injury. Keloid fibroblasts (KF) and keloid keratinocytes (KK) are key contributors to keloid pathogenesis. Although adipose-derived mesenchymal stromal cells (ASCs) have been investigated for keloid therapy, their therapeutic potential and underlying mechanisms require further elucidation. This study aimed to characterize the therapeutic potential of ASCs for human keloid management.
    METHODS: Molecular profiles associated with keloid pathogenesis were characterized through integrative analyses, including gene expression profiling, functional annotation, protein-protein interaction mapping, and hub gene identification. Single-cell RNA sequencing (scRNA-seq) was used to identify ASC subpopulations with inhibitory effects on keloid development. The therapeutic efficacy of these subpopulations was subsequently assessed in a miniature pig model of hypertrophic scar.
    RESULTS: Upregulation of hub genes such as NOG and IL6 was strongly associated with KF formation, whereas increased expression of APP and NOTCH1 was implicated in KK development. Functional scRNA-seq analysis identified ASC subpopulations capable of inhibiting the development of KF, KK, or both through molecular interactions with these hub genes. Administration of porcine ASCs enriched in the identified inhibitory subpopulations effectively prevented hypertrophic scar formation in the miniature pig model.
    CONCLUSION: This study delineated key molecular signatures underlying keloid formation and identified ASC subpopulations with targeted inhibitory activity against pathological cell types involved in keloid development. These findings support the potential application of ASC-based interventions for prophylaxis and treatment of hypertrophic scarring in humans.
    Keywords:  ASCs; Keloid; Molecular signatures; Single cell transcriptome; Stem cell therapy
    DOI:  https://doi.org/10.1007/s11010-025-05463-0
  24. Int J Pharm. 2026 Jan 04. pii: S0378-5173(26)00012-8. [Epub ahead of print]690 126564
      Cartilage injuries often lead to degeneration and the subsequent development of osteoarthritis (OA), presenting considerable clinical hurdles. Biomaterial-driven tissue engineering has emerged as a global research frontier for addressing these challenges, particularly for irreparable cartilage damage and chronic OA. Three-dimensional (3D) printed hydrogels, owing to their resemblance to the extracellular matrix (ECM), demonstrate immense promise in cartilage tissue engineering as scaffolds for cartilage regeneration. This review provides a comprehensive examination of contemporary biomaterials utilized in cartilage scaffolds, emphasizing their characteristics, gelation mechanisms, and the synergistic effects of ions (e.g., Li+, Si4+) on cartilage and subchondral bone regeneration. Furthermore, it delves into the challenges and future perspectives of hydrogel applications in cartilage tissue engineering. By reviewing both domestic and international literature on biomaterials for cartilage repair and their applications, we aim to clarify the principles for establishing biological and mechanical evaluation protocols for various scaffolds. Additionally, we assess the current research advancements and identify existing bottlenecks. To mimic the intricate structural, biological, and mechanical attributes of native articular cartilage, the development of novel composite hydrogels is imperative. In conclusion, the pressing need for comprehensive, long-term, randomized, and independent clinical trials is emphasized to thoroughly understand the effectiveness and safety profiles of these biomaterials.
    Keywords:  3D printing; Bioink; Cartilage regeneration; Scaffold engineering
    DOI:  https://doi.org/10.1016/j.ijpharm.2026.126564