bims-meract Biomed News
on Metabolic reprogramming and anti-cancer therapy
Issue of 2026–10–11
sixteen papers selected by
Andrea Morandi, Università degli Studi di Firenze



  1. Cancer Lett. 2026 Oct 08. pii: S0304-3835(26)00649-X. [Epub ahead of print] 218885
      The emergence of drug-tolerant persister (DTP) cells poses a major obstacle to durable responses to EGFR tyrosine kinase inhibitors (TKIs) in EGFR-mutant non-small cell lung cancer (NSCLC). However, how metabolic programming orchestrates this transient and reversible adaptive resistance remains largely unexplored. Here we report that proline dehydrogenase 1 (PRODH) promotes the persistence of osimertinib tolerance in NSCLC by increasing mitochondrial respiration in an enzyme activity-independent manner. Mechanistically, PRODH facilitates the recruitment of sirtuin-3 (SIRT3) to mitochondrial transcription factor B2 (TFB2M), resulting in the deacetylation of TFB2M at lysine 127 and lysine 153. This post-translational modification is indispensable for the mtDNA-binding capacity of TFB2M and subsequent initiation of mitochondrial transcription. Loss of PRODH, or increased TFB2M acetylation, impairs DTP formation and delays tumor relapse. Collectively, these data reveal a previously unrecognized role for PRODH in linking mitochondrial metabolism to drug-tolerant persistence, suggesting that targeting PRODH or TFB2M deacetylation may offer a promising strategy to overcome osimertinib resistance and suppress tumor relapse in EGFR-mutant NSCLC.
    Keywords:  Drug-tolerant persistence; Mitochondrial transcription; NSCLC; Proline dehydrogenase 1; TFB2M acetylation
    DOI:  https://doi.org/10.1016/j.canlet.2026.218885
  2. Cancer Res. 2026 Oct 05.
      Clinical outcomes are often suboptimal in colorectal cancer (CRC) patients treated with neoadjuvant chemotherapy (NAC). A key determinant of the response to NAC is the functional state of tumor-infiltrating immune cells. Understanding how NAC reshapes the immunological landscape will be essential for refining patient stratification and identifying effective combination treatment strategies. Here, we analyzed paired samples before and after NAC treatment by single-cell RNA sequencing, revealing that NAC treatment significantly reshaped the immune microenvironment. Tumors from NAC non-responders featured increased immunosuppressive M2-like macrophage infiltration, which correlated with elevated phosphatidylserine-specific phospholipase A1 (PLA1A). Mechanistically, PLA1A hydrolyzed phosphatidylserine (PS) exposed by chemotherapy to elevate lysophosphatidylserine (LysoPS), which activated the P2ry10 receptor and downstream signaling to promote M2-like macrophage polarization. Importantly, pharmacological inhibition of PLA1A by cilengitide synergized with chemoimmunotherapy to suppress tumor progression in murine models. Clinically, high plasma PLA1A levels negatively correlated with responses to chemoimmunotherapy. Collectively, these findings reveal a chemotherapy-driven metabolic axis that induces an immunosuppressive milieu by increasing lysoPS release. This axis highlights PLA1A as a therapeutic target to mitigate immunosuppression and improve chemoimmunotherapy efficacy.
    DOI:  https://doi.org/10.1158/0008-5472.CAN-26-0955
  3. Nat Commun. 2026 09 07. pii: 10594. [Epub ahead of print]17(1):
      Cancer stem cells (CSCs) can adapt their metabolism, which limits the effectiveness of therapies targeting metabolic pathways. Here we show that high glucose conditions promote metformin resistance in CD133⁺ colorectal CSCs by driving a switch from glucose dependence to lipid use. Mechanistically, metformin increases LDHA-dependent lactate production in these cells under high glucose conditions. Lactate accumulation enhances histone H3 lysine 18 lactylation (H3K18la), which activates c-JUN and induces CD36 expression. CD36 promotes free fatty acid (FFA) uptake and lipid droplet (LD) formation, providing fuel for fatty acid β-oxidation. This process generates ATP and NADPH, reduces energy stress and reactive oxygen species, and thereby supports CSC survival during metformin treatment. In vitro and in vivo, inhibition of either LDHA or CD36 restores metformin sensitivity in CD133⁺ colorectal CSCs. These findings identify a lactate-driven epigenetic and metabolic pathway underlying metformin resistance and suggest LDHA and CD36 as potential therapeutic targets.
    DOI:  https://doi.org/10.1038/s41467-026-77051-9
  4. Cancer Res. 2026 Oct 05.
      Despite the clinical success of programmed cell death protein 1 (PD-1) checkpoint blockade in many cancer types, its efficacy in glioblastoma remains notably limited, underscoring the critical need to uncover primary resistance mechanisms and identify synergistic therapeutic targets. To discover genes modulating αPD-1 immunotherapy response, we performed an in vivo CRISPR-Cas9 screen in immunocompetent mice bearing glioblastoma, which prioritized the glutamine (Gln) transporter SLC38A5 as a candidate modulator of αPD-1 immunotherapy efficacy. In human glioblastoma, SLC38A5 was significantly upregulated compared with normal brain tissue. Ablation of SLC38A5 did not impair glioblastoma cell intrinsic growth but profoundly sensitized glioblastoma to αPD-1 therapy in a CD8+ T cell-dependent manner, leading to enhanced anti-tumor immunity and tumor control. Mechanistically, SLC38A5 deficiency created a Gln-enriched tumor microenvironment by impairing Gln uptake of glioblastoma cells. This metabolic rewiring enhanced CD8+ T cell function via SLC1A5-dependent Gln utilization and promoted MHC-I-mediated antigen presentation in glioblastoma cells through a Gln-glutathione (GSH)-reactive oxygen species (ROS) axis. Furthermore, an SLC38A5-targeting nanobody was developed that efficiently accumulated in orthotopic glioblastoma and potentiated αPD-1 therapy to suppress brain tumor growth in vivo. Overall, this study establishes SLC38A5 as a metabolic immune regulator in glioblastoma and presents a promising Nb-based strategy for overcoming αPD-1 immunotherapy resistance.
    DOI:  https://doi.org/10.1158/0008-5472.CAN-26-0774
  5. Biochim Biophys Acta Rev Cancer. 2026 Oct 05. pii: S0304-419X(26)00205-2. [Epub ahead of print]1881(6): 189733
      Breast cancer remains the most frequently diagnosed malignancy and a leading cause of cancer-related mortality among women worldwide. Despite substantial advances in endocrine therapy, human epidermal growth factor receptor 2 (HER2)-targeted therapy, chemotherapy, and immunotherapy, therapeutic resistance and metastatic progression remain major clinical challenges. Accumulating evidence has established metabolic reprogramming as a fundamental hallmark of breast cancer, enabling tumor cells to adapt dynamically to nutrient limitation, hypoxia, oxidative stress, and therapeutic pressure. Beyond the classical Warburg effect, breast cancer cells exhibit remarkable metabolic plasticity through coordinated reprogramming of glycolysis, oxidative phosphorylation (OXPHOS), glutamine metabolism, lipid metabolism, and one‑carbon metabolism. These metabolic alterations not only sustain bioenergetic and biosynthetic demands but also reshape the tumor microenvironment (TME), promote immune evasion, maintain cancer stemness, and facilitate metastatic dissemination. Recent studies further reveal that metabolic heterogeneity varies substantially across molecular subtypes, metastatic niches, and treatment-resistant cell populations. In parallel, stromal cells, cancer-associated fibroblasts (CAFs), tumor-associated macrophages (TAMs), and immune cells establish complex metabolic symbiotic relationships with tumor cells through metabolite exchange and immunometabolic regulation. Importantly, therapy-induced metabolic adaptation has emerged as a central mechanism underlying resistance to chemotherapy, endocrine therapy, HER2-targeted therapy, CDK4/6 inhibitors, and immune checkpoint blockade. In this review, we comprehensively summarize the molecular mechanisms governing metabolic reprogramming and metabolic plasticity in breast cancer, with particular emphasis on how they contribute to tumor progression, metastasis, immune escape, and therapeutic resistance. We further discuss emerging therapeutic strategies targeting glycolysis, mitochondrial metabolism, glutamine utilization, lipid metabolism, ferroptosis-associated pathways, and immunometabolic vulnerabilities. Finally, we highlight current challenges in clinical translation, including metabolic heterogeneity, compensatory pathway activation, and limited therapeutic selectivity, and outline future directions that integrate multi-omics profiling, spatial metabolomics, and precision metabolic targeting for individualized breast cancer therapy.
    Keywords:  Breast cancer; Cancer stem cells; Ferroptosis; Immunometabolism; Lipid metabolism; Metabolic plasticity; Metabolic reprogramming; Oxidative phosphorylation; Therapeutic resistance; Tumor microenvironment
    DOI:  https://doi.org/10.1016/j.bbcan.2026.189733
  6. Cell. 2026 Oct 06. pii: S0092-8674(26)01122-0. [Epub ahead of print]
      Metabolic competition between tumors and T cells drives immune evasion, but the transporters and mechanisms remain largely elusive. Here, we establish the CareSLCs platform and identify that SLC52A3-mediated vitamin B2 (VB2) uptake is indispensable for T cell antitumor immunity. Mechanistically, VB2 deficiency impairs mitochondrial respiration and glutathione regeneration, leading to mitophagy, labile iron accumulation, and lipid peroxidation that trigger T cell ferroptosis. Unexpectedly, tumors preferentially employ SLC52A2, not SLC52A3, to scavenge VB2 and outcompete T cells. Tumor SLC52A2 ablation enhances T cell function in immunocompetent hosts without appreciably affecting intrinsic tumor growth. Clinically, high tumoral SLC52A2 correlates with T cell dysfunction and poor survival, whereas dietary VB2 intake is associated with reduced cancer risks. Thus, VB2 supplementation or SLC52A3 overexpression augments CAR-T cell antitumor efficacy. Our results suggest that tumoral VB2 competition establishes a metabolic checkpoint driving T cell ferroptosis and that enhancing VB2 uptake reinvigorates T cells to improve cancer immunotherapy.
    Keywords:  CAR-T cell therapy; SLC52A2; SLC52A3; ferroptosis; metabolic competition; vitamin B2
    DOI:  https://doi.org/10.1016/j.cell.2026.09.020
  7. Proc Natl Acad Sci U S A. 2026 Oct 13. 123(41): e2524540123
      Concurrent chromosomal 17q-gain and MYCN amplification define a subset of neuroblastoma associated with particularly adverse clinical outcomes. However, how these genetic alterations synergize to promote tumor progression and whether their cooperation confers therapeutic vulnerabilities remain elusive. We herein performed a CRISPR-based functional screen targeting 17q-gain genes and identified the RNA m6A reader IGF2BP1 as a critical MYCN collaborator to promote aggressive neuroblastomas via activation of phosphoribosylaminoimidazole succinocarboxamide synthetase (PAICS), a key enzyme involved in de novo purine biosynthesis. Rewiring of PAICS-mediated nucleotide metabolism enabled tumor cells to sustain necessary purine pools for productive transcription of replicative stress-responsive genes, including CHK1, to cope with the exacerbated replication stress. Pharmacological inhibition of CHK1 elicited a robust immune reprogramming, leading to activation of cGAS-STING signaling, upregulation of Major Histocompatibility Complex class I expression, and synergistic tumor suppression with immune checkpoint blockade. Altogether, we identify an IGF2BP1/MYCN-PAICS-CHK1 axis that drives aggressive neuroblastoma phenotypes and constitutes an actionable vulnerability for therapeutic intervention.
    Keywords:  IGF2BP1; MYCN; immunotherapy; neuroblastoma; tumor metabolism
    DOI:  https://doi.org/10.1073/pnas.2524540123
  8. Cancer Res. 2026 Oct 05.
      Excessive cyclin D1 accumulation is a frequent oncogenic event in head and neck squamous cell carcinoma (HNSCC) and esophageal squamous cell carcinoma (ESCC). Although classically associated with enhanced proliferation and genomic instability, we revealed that cyclin D1 dysregulation induces metabolic rewiring that leads to unexpected metabolic dependencies. Sustained nuclear retention of cyclin D1 drove metabolic reprogramming through activation of CDK4/6 and downregulation of mitochondrial isocitrate dehydrogenase 3 (IDH3), reducing α-ketoglutarate and NADH production. This metabolic alteration increased glutamine dependence and elevated autophagic flux, and co-targeting autophagy and glutamine metabolism suppressed the growth of squamous cell carcinoma models in vitro and in vivo. Together, these findings highlight a therapeutic strategy for HNSCC and ESCC that leverages metabolic reprogramming induced by dysregulated cyclin D1/CDK4 activity, with potential applicability to patients with tumors refractory to conventional therapies.
    DOI:  https://doi.org/10.1158/0008-5472.CAN-26-0389
  9. Adv Sci (Weinh). 2026 Oct 06. e78107
      Intermittent fasting (IF) exerts antitumor activity in colorectal cancer (CRC), but the tumor-intrinsic metabolic mechanism linking nutrient restriction to antitumor immunity remains unclear. In this study, IF reduced taurine availability and suppressed tumor growth in a CD8+ T cell-dependent manner. Taurine supplementation attenuated this effect, whereas pharmacological inhibition of taurine uptake partially recapitulated fasting-associated tumor suppression in preclinical models. Mechanistically, taurine is associated with the endoplasmic reticulum chaperone GRP78 and contributes to the maintenance of PERK abundance under nutrient stress. As a metabolic consequence of IF, taurine restriction impaired PERK stability, suppressed downstream ERO1A signaling, and redirected CRC cells from stress tolerance toward paraptosis-like immunogenic stress. PERK loss enhanced CD8+ T-cell activation, remodeled the tumor microenvironment toward a less suppressive state, and supported tumor control in combination with anti-PD-1 therapy. The present study identified taurine restriction as a functional metabolic feature of IF that compromises PERK-dependent stress adaptation and promotes antitumor immunity in CRC.
    Keywords:  PERK; anti‐tumor effect; colorectal cancer; intermittent fasting; taurine; tumor microenvironment
    DOI:  https://doi.org/10.1002/advs.78107
  10. Cell. 2026 Oct 06. pii: S0092-8674(26)01126-8. [Epub ahead of print]
      It is well established that glutathione (GSH) is mainly utilized by glutathione peroxidase 4 (GPX4) to diminish peroxidized phospholipids and defend against ferroptosis. However, we found that GSH robustly protects a variety of GPX4 knockout (KO) cells from ferroptosis, thus indicating that there is an alternative pathway for GSH to suppress ferroptosis. By carrying out genome-wide CRISPR-Cas9 screening, we identified that ferroptosis suppressor protein 1 (FSP1) is the key factor mediating the GPX4-independent protective effect of GSH. Mechanistically, FSP1 uses GSH to generate reduced ubiquinone, which scavenges oxidized lipids and suppresses ferroptosis. Inhibition of FSP1 abolishes this GSH-dependent ferroptosis protection both in vitro and in vivo. Distinct from NAD(P)H-mediated ubiquinone reduction, GSH-stimulated generation of reduced ubiquinone via FSP1 is independent of flavin adenine dinucleotide (FAD). Together, our work clarifies a new mechanism of GSH-mediated ferroptosis suppression, thus highlighting the potential that targeting GSH metabolism should be beneficial for ferroptosis-related diseases whether or not it is related to GPX4.
    Keywords:  FSP1; ferroptosis; glutathione metabolism; ubiquinone reduction
    DOI:  https://doi.org/10.1016/j.cell.2026.09.024
  11. Trends Pharmacol Sci. 2026 Oct 07. pii: S0165-6147(26)00237-3. [Epub ahead of print]
      Antimetabolites have been used to treat cancer since the 1950s, yet how tumors survive remains unclear. Two studies by Moss and colleagues and Witus and colleagues show that surviving cells recycle nucleotides and reshape mitochondria, revealing a shared resistance program. Because this program is measurable, it could identify, before treatment, which patients would benefit from drugs that block it.
    Keywords:  5-fluorouracil resistance; UCK2; complex I inhibitors; molecular glue; thiopurine pharmacology
    DOI:  https://doi.org/10.1016/j.tips.2026.09.008
  12. Biochim Biophys Acta Rev Cancer. 2026 Oct 08. pii: S0304-419X(26)00203-9. [Epub ahead of print] 189731
      Currently, cancer treatment mainly includes surgery, radiotherapy, chemotherapy, immunotherapy, and targeted therapy, wherein radiotherapy is one of the core modalities. However, its efficacy is often limited by radiotherapy resistance in the tumour cells. In recent years, studies have found that tumour cells undergo lipid metabolic reprogramming to enhance lipid synthesis, uptake, and storage, thereby adapting to the energy and structural adjustment demands imposed by radiotherapy, gaining survival advantage and developing radiation resistance. This review mainly focused on the role of lipid metabolic changes, including fatty acids, cholesterol, and phospholipids, in radiation resistance, aiming to provide ideas for achieving individualised precision radiotherapy.
    Keywords:  Lipid metabolism; Metabolic reprogramming; Radioresistance; Radiosensitization
    DOI:  https://doi.org/10.1016/j.bbcan.2026.189731
  13. Cancer Commun (Lond). 2026 ;46 0054
      Background: Immune checkpoint inhibitors targeting programmed cell death protein 1 (PD-1) have substantially improved the treatment of multiple cancers; however, only a small proportion of gastric cancer (GC) patients achieve durable clinical benefit. The underlying tumor-intrinsic mechanisms driving resistance to anti-PD-1 therapy remain poorly understood. This study aimed to identify key regulators of immunotherapy resistance in GC and to elucidate their functional and mechanistic roles. Methods: Transcriptomic data from anti-PD-1-responsive and anti-PD-1-resistant GC patients were analyzed and integrated with mouse model data and publicly available single-cell RNA sequencing datasets. Functional experiments, including in vitro assays and in vivo tumor models, were performed to validate candidate genes and explore their roles in tumor progression and immunotherapy resistance. Results: GULP PTB domain-containing engulfment adaptor 1 (GULP1) was identified as a key driver of resistance to anti-PD-1 therapy in GC. Elevated GULP1 expression was associated with poor prognosis and unfavorable clinical responses to PD-1 blockade. GULP1 promoted GC progression and attenuated the therapeutic efficacy of anti-PD-1 treatment. Functionally, GULP1 facilitated the accumulation and metabolic reprogramming of CD36+ programmed death-ligand 1 (PD-L1)+ tumor-associated macrophages (TAMs) by shaping a lipid-enriched tumor microenvironment, thereby impairing CD8+ T-cell function. Mechanistically, GULP1 promoted insulin-induced gene 2 (INSIG2) palmitoylation through the recruitment of zinc finger DHHC-type palmitoyltransferase 8 (zDHHC8), resulting in sterol regulatory element-binding protein 1 (SREBP1) nuclear translocation and enhanced de novo fatty acid biosynthesis. Importantly, pharmacological inhibition of Gulp1 with glycyrrhizic acid significantly restored sensitivity to anti-PD-1 therapy in vivo. Conclusions: Collectively, these findings uncovered a previously unrecognized GULP1-fatty acid-CD36+PD-L1+ TAM-CD8+ T-cell axis that drove resistance to PD-1 blockade in GC, highlighting GULP1 as a promising therapeutic target and predictive biomarker for immunotherapy responsiveness.
    DOI:  https://doi.org/10.34133/cancomm.0054
  14. Adv Sci (Weinh). 2026 Oct 08. e78212
      Chronic inflammation is a hallmark of hepatocellular carcinoma (HCC) and is closely linked to aberrant arachidonic acid (AA) metabolism; however, whether AA mobilization is driven by defined upstream regulatory mechanisms and can be therapeutically targeted remains largely unresolved. Here, we identify cytosolic phospholipase A2 (cPLA2) as a central regulator of AA-dependent inflammatory signaling in hepatocarcinogenesis and a direct pharmacological target of nuciferine (NF). Using diethylnitrosamine (DEN)/carbon tetrachloride (CCl4)-induced HCC mouse models with transcriptomic and lipidomic profiling, we show that cPLA2 activation is progressively elevated during tumorigenesis, leading to excessive eicosanoid production that fuels NF-κB-driven inflammation. NF markedly suppresses tumor burden, fibrosis, and inflammatory signaling, accompanied by broad inhibition of AA metabolism. Mechanistically, NF directly binds to the C2 domain of cPLA2, disrupting Ca2 +-dependent membrane translocation and attenuating its activation. Importantly, Pla2g4a deficiency significantly attenuates hepatocarcinogenesis and abolishes the therapeutic effects of NF, establishing cPLA2 as essential for its antitumor activity. In human HCC, increased cPLA2 activation correlates with increased AA metabolism, inflammatory signatures, and poor patient survival. These findings uncover cPLA2-dependent AA metabolism as a critical inflammatory axis in HCC and identify NF as a direct cPLA2-targeting agent, highlighting a pharmacologically actionable metabolic node for liver cancer therapy.
    Keywords:  arachidonic acid metabolism; cytosolic phospholipase A2; hepatocellular carcinoma; nuciferine
    DOI:  https://doi.org/10.1002/advs.78212
  15. Cancer Res. 2026 Oct 08.
      Antitumor T-cell function is tightly coupled with cellular metabolism, which is severely compromised by glucose deprivation and elevated sodium chloride (NaCl) in the solid tumor microenvironment (TME). Here, we demonstrated that glucose restriction markedly impaired activation, cytotoxicity, and persistence of CAR-T cells while promoting exhaustion, whereas high NaCl partially reversed these defects. Overexpression of the sodium-glucose cotransporter SGLT2 in CAR-T cells to simultaneously enhance glucose and NaCl uptake led to stronger antitumor activity in multiple solid tumor xenograft models. Mechanistically, SGLT2 overexpression elevated glycolysis and mitochondrial fitness, inhibited ferroptosis, and activated the AKT-mTOR pathway. These findings establish a metabolic engineering strategy that boosts glucose utilization in CAR-T cells to overcome TME stress and enhance solid tumor control.
    DOI:  https://doi.org/10.1158/0008-5472.CAN-26-1157
  16. Blood Neoplasia. 2026 Nov;3(4): 100281
      Immunomodulatory drugs (IMiDs) are a cornerstone of multiple myeloma treatment, and newer cereblon E3 ligase modulatory drugs (CELMoDs) are in clinical trials. However, a major barrier to improving patient outcomes is the inevitable development of resistance to these agents. To explore the mechanisms underlying IMiD/CELMoD resistance and identify novel targets for treatment, human cell line models of acquired IMiD/CELMoD resistance were generated. A quantitative proteome analysis of these models identified common changes in lipid synthesis proteins, and glucose-labeling experiments confirmed altered lipid flux. Proteomic analysis of paired patient samples at diagnosis and relapse on IMiD suggested similar changes in lipid pathways. A genome-wide CRISPR screen performed in a human multiple myeloma cell line with acquired CELMoD resistance identified dependencies in the lipid pathway genes stearoyl-CoA desaturase and membrane-bound transcription factor peptidase, site 1. This study has led to novel insights into lipid pathway changes in the IMiD/CELMoD-resistant state, which may represent targetable cancer cell vulnerabilities.
    DOI:  https://doi.org/10.1016/j.bneo.2026.100281