bims-nakice Biomed News
on Natural killer cells
Issue of 2026–06–14
eighteen papers selected by
Santosh Phuyal, Oslo Universitetssykehus



  1. Inflamm Res. 2026 Jun 08. pii: 136. [Epub ahead of print]75(1):
       BACKGROUND: Natural killer (NK) cells are crucial innate immune effectors with pivotal roles in tumor cytotoxicity and antiviral defense. Arntl (also known as Bmal1), a core circadian rhythm regulator, is essential for maintaining normal immune function; however, its specific regulatory impact on NK cells remains unclear. This study aimed to elucidate the mechanism by which Arntl governs NK cell functionality.
    METHODS: Conditional knockout of Arntl was induced in hematopoietic cells of mice. NK cell abundance, development, and effector functions were assessed in the spleen and bone marrow. Functional assays measured CD107a degranulation, IFN-γsecretion, target cell elimination (MHC-I-deficient cells), activation status, oxidative metabolism, and responsiveness to IL-15.
    RESULTS: Through conditional knockout of Arntl in hematopoietic stem cells, we observed a significant reduction in NK cell within the spleen and bone marrow of mice, without impairing NK cell development. Functional assessments revealed that Arntl-deficient NK cells exhibited diminished CD107a degranulation, impaired IFN-γ secretion, and a markedly compromised ability to eliminate MHC-I-deficient target cells. Furthermore, Arntl-deficient NK cells displayed suppressed activation and reduced oxidative metabolism.
    CONCLUSION: Arntl is an important regulator of NK cell immunity. Its deficiency impairs NK cell effector functions by reducing responsiveness to IL-15, providing novel insights into the circadian control of anti-tumor and anti-viral responses.
    Keywords:  Arntl; IL-15; NK function; p-STAT5
    DOI:  https://doi.org/10.1007/s00011-026-02285-8
  2. Cell Rep. 2026 Jun 11. pii: S2211-1247(26)00605-4. [Epub ahead of print]45(6): 117527
      Natural killer (NK) cells are cytotoxic innate lymphoid cells which directly kill tumor cells, thus represent an attractive target for immunotherapy. However, NK cells face immunosuppression in the tumor microenvironment (TME), rendering them dysfunctional. While cancer-associated fibroblasts (CAFs) represent an abundant, heterogeneous component of pancreatic ductal adenocarcinoma (PDAC), their interplay with NK cells is largely understudied. Analyzing human samples and employing mouse models of PDAC and functional assays, we observed that intratumoral NK cells are immature, and TGF-β driven myofibroblastic (my)CAFs are strong NK suppressors, in contrast to inflammatory (i)CAF. Furthermore, myCAF-enriched tumor areas excluded NK cells, consistent with their reduced capacity to attract NK cells. Pancreatic CAFs in general reduced NK cell cytotoxicity by direct contact and via soluble factors, including prostaglandin E2 (PGE2). This work reveals distinct and overlapping roles of CAF subpopulations on NK cell functions, suggesting that overcoming CAF-imposed barriers to NK cytotoxicity and tumor infiltration is essential to unleash their anti-tumoral properties.
    Keywords:  CAF; CP: cancer; CP: immunology; NK cells; PDAC; PGE2; fibroblasts; tumor microenvironment
    DOI:  https://doi.org/10.1016/j.celrep.2026.117527
  3. Biomater Res. 2026 ;30 0376
      Non-small cell lung cancer remains a major clinical challenge due to aggressive metastasis and limited therapeutic modalities. The innate cytotoxicity of natural killer (NK) cells and their ability to eliminate malignant cells in an antigen-independent manner have attracted considerable interest for cancer immunotherapy. However, the therapeutic performance of NK cells in solid tumors is severely constrained by (a) tumor heterogeneity, (b) physical barriers within the tumor microenvironment, and (c) insufficient tumor-targeting specificity. To address these challenges, we here develop a lipid biomaterial that enables the simultaneous surface engineering of cancer and NK cells to enhance their physical engagement within complex tumor microenvironments. The developed lipid biomaterials are composed of (a) a lipid moiety for stable surface anchoring and (2) complementary dibenzocyclooctyne (DBCO) and azide (N3) functional groups to mediate bioorthogonal click-reaction-driven cell-cell interactions. This modular design allows the rapid and non-genetic engineering of cell surfaces, promoting tumor-specific targeting through DBCO-N3 click reactions, while simultaneously enhancing NK cell activation and cytotoxic function. Surface engineering of non-small cell lung cancer cells (N3-cancer) and NK cells (D-NK) using lipid-N3 and lipid-DBCO substantially improved cancer recognition, immune activation, and NK cell-mediated cytotoxicity. Moreover, lipid-N3 successfully labeled 3-dimensional lung tumoroids embedded in collagen hydrogels that recapitulate the structure of native lung tissue, leading to superior antitumor efficacy upon interaction with D-NK cells. Collectively, this lipid-biomaterial-based strategy provides a versatile, receptor-independent approach to augment NK cell-based immunotherapy against heterogeneous solid tumors, offering a promising approach that avoids reliance on predefined tumor-specific ligand-receptor pairs.
    DOI:  https://doi.org/10.34133/bmr.0376
  4. Research (Wash D C). 2026 ;9 1316
      Natural killer (NK) cells are innate cytotoxic lymphocytes capable of eliminating malignant cells independent of prior antigen sensitization, thereby constituting a critical first-line defense in tumor immunosurveillance. Within the tumor microenvironment (TME), metabolic dysregulation profoundly impairs NK cell effector function, and accumulating studies have investigated the regulatory effects of extracellular metabolites on NK cells. This review systematically delineates the direct mechanistic interplay between extracellular metabolites and NK cell antitumor immunity, with particular emphasis on their roles as structural components, bioenergetic substrates, metabolic reprogramming inducers, modification donors, gene transcription regulators, stress response mediators, intracellular pH modulators, and ligands engaging cognate receptors to initiate downstream signaling cascades. Furthermore, we discuss the therapeutic strategies targeting metabolites to potentiate NK cell functionality, encompassing modulation of metabolite availability within the TME and exploitation of metabolite-sensitive signaling axes. In addition, combination of metabolic interventions with other modalities, such as adoptive NK cell transfer and anti-programmed cell death protein 1/programmed death-ligand 1 therapy, is also evaluated for prospective applications. This review provides a conceptual framework for understanding the metabolic regulation of NK cells, highlighting emerging directions for advancing NK-cell-centered cancer immunotherapy through metabolic modulation.
    DOI:  https://doi.org/10.34133/research.1316
  5. Methods Cell Biol. 2026 ;pii: S0091-679X(26)00076-2. [Epub ahead of print]208 85-97
      Adoptive cell therapies based on immune effector cells - Natural Killer (NK) cells, Cytotoxic T Lymphocytes (CTL) - represent a promising approach for the treatment of resistant tumors, especially for the management of hematological malignancies. The rapid growth of this field emphasises the need for reliable in vitro methods to evaluate the cytotoxic potential of the cell products developed against the desired target cells, many of which are cells in suspension and consequently pose additional technical challenges. Here, we present a flow-cytometry-based protocol for the quantification of tumor cell death after co-culture with immune effector cells. Compared to earlier techniques, this approach allows for the identification of target cells and quantification of both their basal and effector cell-induced apoptotic death. The protocol described is highly adaptable, making it suitable for the study of fragile or limited patient samples, the evaluation of combination therapies with drugs or antibodies, and for the analysis of additional cellular markers or cell death mechanisms. Altogether, the protocol provides an assay setup and gating strategy that generate precise and reproducible data, essential for adoptive cell therapy optimization.
    Keywords:  Cytotoxic T lymphocytes (CTL); Cytotoxicity; Flow cytometry; Immunotherapy; Natural killer (NK); Tumor immunology
    DOI:  https://doi.org/10.1016/bs.mcb.2026.02.008
  6. Talanta. 2026 Jun 04. pii: S0039-9140(26)00755-1. [Epub ahead of print]310 130099
      Efficient and high-purity isolation of immune cells is a critical prerequisite for downstream immunological analyses and cell-based assays. However, conventional label-free separation methods, such as density gradient centrifugation, are limited by lengthy processing times and a suboptimal separation efficiency. To address these issues, a contraction-expansion array (CEA) microfluidic device is proposed for the label-free isolation of natural killer (NK) cells from blood samples through geometry-mediated hydrodynamic modulation. The microchannel design consists of contraction-expansion arrays featuring either square or hexagonal expansion regions, combined with contraction widths of 75 or 100 μm, enabling precise modulation of the inertial lift and Dean drag forces and inducing size-dependent particle migration and separation. Numerical simulations were performed using COMSOL Multiphysics to analyze the flow field distribution and particle migration behavior. Experimental validation with 10 and 20 μm polystyrene particles demonstrated a strong agreement with the simulation results, confirming the validity of the numerical model. The optimized device, featuring hexagonal expansion regions with a contraction width of 100 μm, achieved a recovery rate of 83.8% and a purity of 97.1% for 10 μm particles at a flow rate of 125 μL/min. To address the challenge of overlapping cell size distributions in practical blood assays, a selective cell clustering reagent was employed to aggregate the non-NK cells and red blood cells into larger clusters, thereby enhancing size-based separation. The device achieved an NK cell recovery of 70.9%, a purity of 91.2%, and a viability of 95.3%. Overall, the proposed device provides a high-throughput, label-free, and biocompatible platform for NK cell isolation, offering strong potential for integration into cancer immunotherapy and clinical diagnostic workflows.
    Keywords:  COMSOL multiphysics; Contraction–expansion array (CEA); Label-free separation; Microfluidics; Natural killer (NK) cells; Size-selective
    DOI:  https://doi.org/10.1016/j.talanta.2026.130099
  7. Cancers (Basel). 2026 Jun 03. pii: 1833. [Epub ahead of print]18(11):
      Background/Objectives: Adoptive transfer of allogeneic natural killer (NK) cells represents a promising off-the-shelf immunotherapy for cancer, offering advantages in safety and availability over autologous T cell therapies. However, generating therapeutically sufficient NK cell numbers remains challenging due to their low frequency in blood sources. Engineered feeder cell co-cultures have enabled substantial expansions of NK cells to clinically relevant doses. Methods: We evaluated the plasma cell leukemia-derived ARH-77 cell line as a feeder for ex vivo NK cell expansion from healthy donor peripheral blood mononuclear cells (PBMCs). Unmodified ARH-77 was compared to K562, followed by engineering both lines to co-express B7-H6 (NKp30 ligand), CD137L (4-1BBL), IL-15, and IL-15Rα via sequential lentiviral transduction. PBMCs were co-cultured with irradiated feeders in cytokine-supplemented (IL-2, IL-21, and later IL-15) RPMI-1640 or DMEM/F-12 medium for up to 28 days. Expansion (fold change in CD3-CD56+ cells), purity, surface receptor expression, and cytotoxicity (against K562 targets) were quantified. Results: Unmodified ARH-77 supported significantly greater NK cell expansion than K562 (model-estimated 681-fold vs. 155-fold at week 4 in RPMI; p = 0.0018), with higher purity but comparable cytotoxicity and receptor profiles. Engineered ARH-77 cells achieved robust expansion in RPMI, comparable to that of engineered K562 cells. In optimized DMEM/F-12 medium, engineered ARH-77 drove superior expansion (up to model-estimated 101,241-fold; 95% CI 46,771-219,146 at week 4), significantly outperforming engineered K562 (4.4-fold greater; 95% CI 1.01 to 18.54; p = 0.0479) while maintaining high purity and equivalent cytotoxicity. Substantial inter-donor variability influenced expansion magnitude, though relative feeder performance remained consistent across donors. Conclusions: Genetically modified ARH-77 feeder cells provide a potent platform for large-scale ex vivo expansion of functional NK cells.
    Keywords:  ARH-77; expansion; feeder cells; immunotherapy; natural killer cells
    DOI:  https://doi.org/10.3390/cancers18111833
  8. Biomaterials. 2026 Jun 01. pii: S0142-9612(26)00378-9. [Epub ahead of print]335 124354
      Metabolic rewiring-induced immune dysfunction limits the efficacy of NK cell-based immunotherapy for solid tumors, underscoring the need for targeted metabolic interventions. In this study, we found that NK cells within tumor tissues exhibited lipid accumulation and decreased infiltration across multiple tumor models, including B16F10 melanoma, MC38 colon carcinoma, 4T1 breast cancer, and LLC lung carcinoma. Among the selected common selenium species, including Selenocystine (SeCys2), selenomethionine (SeMet) and selenium nanoparticles (SeNPs), SeNPs were found to effectively reverse abnormal lipid metabolism-mediated NK cell immune exhaustion induced by palmitic acid, oleic acid, or tumor-conditioned media. Additionally, SeNPs also effectively reverse palmitic acid-induced diminished antitumor activities in NK cells in vivo. Mechanistically, SeNPs inhibited palmitoylation of the fatty acid transporter CD36, restricting membrane localization and excessive lipid uptake, thereby preventing PPARδ-mediated mTOR inactivation and mitochondrial dysfunction. Importantly, SeNPs maintained glutathione peroxidase 1 (GPX1) protein abundance by counteracting palmitoylation-dependent downregulation, preserving redox homeostasis and sustaining mTOR signaling to enhance NK cell immunity. Furthermore, we also found that there is a positive correlation between high GPX1 expression and tumor-infiltrating NK cells in human breast tumor tissues, which further highlights the importance of elevated GPX1 expression in NK cell-mediated antitumor activity. Taken together, this study identifies SeNPs as a metabolic regulator that reprograms dysregulated lipid metabolism to restore NK cell antitumor immunity, which provides a mechanistic framework for developing selenium-based metabolic strategies to enhance cancer immunotherapy.
    Keywords:  GPX1; Lipid metabolism; Natural killer cell; Palmitoylation; Selenium
    DOI:  https://doi.org/10.1016/j.biomaterials.2026.124354
  9. J Immunol Methods. 2026 Jun 11. pii: S0022-1759(26)00055-4. [Epub ahead of print] 114079
      Many studies of human T cell function involve activating primary T cells in vitro to assess functional outcomes. A common model of human T cell activation is polyclonal stimulation with αCD3/αCD28 antibodies. However, subsequent identification of these stimulated T cells in a mixed population is complicated by surface CD3 loss. In particular, both cytotoxic T cells and natural killer (NK) cells can appear CD3-CD8α+, leading to misidentification of NK cells as cytotoxic T cells. To address this limitation, we investigated incorporating intracellular CD3 and surface CD8β staining following αCD3/αCD28 stimulation to improve discrimination between cytotoxic T cells and NK cells. We found that intracellular CD3 staining completely recovers lost CD3 expression. When intracellular staining is not amenable to downstream applications in which live cells are required, we found that CD8β more accurately identifies cytotoxic T cells while excluding NK cells than does the more common CD8α staining. We validated CD8β as a more faithful marker of cytotoxic T cells by comparing cytokine profiles of CD8α or CD8β gated PBMC to those of purified T cells, showing that CD8β most closely mimics the cytokine profile of cytotoxic T cells within a purified T cell population. We conclude that i) intracellular CD3 staining is ideal when cell fixation and permeabilization is possible and ii) surface CD8β staining is best when intracellular CD3 staining is not possible, e.g., when recovery of live cells from fluorescence-activated cell sorting is necessary.
    Keywords:  CD3 downregulation; CD8α; CD8β; Human; Natural killer cells; T cell activation
    DOI:  https://doi.org/10.1016/j.jim.2026.114079
  10. Sci Rep. 2026 Jun 12.
      Natural killer (NK) cells are key for tumor immune defense. Tissue-resident NK subsets often differ from classical CD16+ NKs and can be immunosuppressive. The exact traits and mechanisms of these tissue-resident NKs in the tumor microenvironment (TME) of non-small cell lung cancer (NSCLC) are still unclear. This study aimed to comprehensively analyze NK cells in the NSCLC tumor microenvironment to identify distinct tissue-resident subsets, assess their clinical relevance, and investigate their functional properties and underlying mechanisms in shaping immunosuppression. We identified CD49a+ NK cells as a distinct tissue-resident subset in non-small cell lung cancer surgical specimens. Single-cell RNA sequencing revealed that this subset is associated with poor pathological response to neoadjuvant therapy. The abundance of CD49a+ NK cells negatively correlates with the formation of tertiary lymphoid structures (TLS). These cells exhibit an altered phenotype, characterized by upregulated immune checkpoint genes, downregulated cytotoxicity-related genes, and uniquely elevated expression of CSF-1. This CD49a+ NK cell subset is functionally linked to driving M2 macrophage polarization, and M2 polarization tends to inversely correlate with TLS density. Our findings indicate that CD49a+ NK cells contribute to the induction of M2 macrophage differentiation within the tumor stroma and are unfavorable for TLS formation. Our findings identify a specific CD49a+ tissue-resident NK cell subset that fosters an immunosuppressive microenvironment in NSCLC by impairing TLS formation and driving M2 macrophage polarization, a mechanism that likely contributes to adverse responses to neoadjuvant therapy.
    Keywords:  Anti-PD1; M2 macrophage; Non-small cell lung cancer; Tertiary lymphoid tissue; Tissue resident NK
    DOI:  https://doi.org/10.1038/s41598-026-57649-1
  11. Nature. 2026 Jun;654(8119): 605-606
      
    Keywords:  Cell biology; Developmental biology; Metabolism
    DOI:  https://doi.org/10.1038/d41586-026-01587-5
  12. Dev Cell. 2026 Jun 10. pii: S1534-5807(26)00192-9. [Epub ahead of print]61(6): 1169-1171
      In this issue of Developmental Cell, Gajda et al.1 identified the transcriptional partners and downstream targets of myocardin-related transcription factor A (MRTFA), a regulator of actin transcription and cancer cell stiffness. BK potassium channels emerged as pharmacological targets that stiffen cancer cells and enhance anti-tumor immune surveillance during metastasis.
    DOI:  https://doi.org/10.1016/j.devcel.2026.05.008
  13. Nat Commun. 2026 Jun 11.
      Tumor evolution enables liver cancer cells to acquire survival advantages and evade therapy-induced cell death. However, the role of natural killer (NK) cells in liver cancer evolution remains unclear. Here, we establish immune-humanized spatiotemporal liver cancer models and integrate single-cell, spatial transcriptomic, and CRISPR/Cas9 screening analyses to investigate this process. We demonstrate that early NK cell-mediated immunosurveillance promotes tumor cell state transition and impairs subsequent adaptive immune responses. Mechanistically, NK cells induce lipid metabolic reprogramming, particularly cholesterol accumulation, and enhance tumor stemness, both of which promote liver cancer evolution. Furthermore, combined anti-LAG-3 treatment and liver X receptor activation suppress tumor evolution and improve the efficacy and durability of immune checkpoint blockade in advanced liver cancer. Collectively, our findings identify that NK cell-mediated early immunosurveillance promotes liver cancer evolution and suggest immunometabolic therapy as a potential strategy for advanced liver cancer.
    DOI:  https://doi.org/10.1038/s41467-026-74360-x
  14. Cell Rep. 2026 Jun 10. pii: S2211-1247(26)00566-8. [Epub ahead of print]45(6): 117488
      Increasing cell size drives proteomic changes that impact cell physiology. However, the molecular basis of size-dependent proteome remodeling has remained unclear. Here, we develop an inducible Cyclin D1 expression system in human cells to generate proliferating cells spanning over a 2-fold size range. We use this system to make comprehensive genome-wide measurements of mRNA and protein concentrations and stability. We find that protein and mRNA turnover rates are weakly related to cell size but that mRNA concentrations are strongly size-dependent. This establishes that transcriptional regulation is the basis of proteome remodeling. Live-cell imaging of nascent mRNAs using the MS2 system is used to measure how transcriptional dynamics change with cell size. Larger cells prolong transcriptional bursts but maintain similar burst amplitudes to achieve transcriptional scaling. Together, our results show how transcription is modulated by cell size to remodel the proteome and alter cell physiology.
    Keywords:  CP: molecular biology; bursting; cell biology; cell size; homeostasis; lysosome; scaling; single-molecule imaging; transcription; turnover
    DOI:  https://doi.org/10.1016/j.celrep.2026.117488
  15. Cancer Biother Radiopharm. 2026 Jun 13. 10849785261458459
       BACKGROUND: Cervical cancer harbors a profoundly immunosuppressive tumor microenvironment (TME) that impairs innate and adaptive antitumor immunity and, critically, limits the efficacy of emerging radioimmunotherapy strategies. The NKG2D receptor-ligand axis-comprising the stress-inducible ligands MICA and MICB-constitutes a pivotal innate immune recognition interface whose surface expression on tumor cells determines susceptibility to NKG2D-armed effector cells and, by extension, dictates the targetability of radiolabeled NKG2D-directed probes for precision radionuclide therapy (RNT). Yet the mechanistic basis for NKG2D ligand dysregulation and its implications for radionuclide theranostics in cervical cancer remain poorly defined. This study integrated single-cell RNA sequencing (scRNA-seq) and experimental validation to comprehensively map the NKG2D-axis immune escape landscape in cervical carcinogenesis and to delineate its translational significance for precision RNT target selection and patient stratification.
    METHODS: scRNA-seq datasets (GSM1551311 and GSM1551411) were processed using Seurat and Harmony for cell-type annotation, immune landscape characterization, and radionuclide target density profiling. Louvain clustering was performed at a resolution of 0.8 after evaluating multiple resolution parameters (0.4-1.2) using the clustree package to ensure stable cluster assignments. The top 20 principal components were retained for Uniform Manifold Approximation and Projection (UMAP) embedding based on elbow plot analysis. Harmony integration used default parameters (θ = 2 and λ = 1) with convergence assessed over 20 iterations. Doublet detection was performed using DoubletFinder (v2.0.3) with an estimated doublet rate of 4.0%; additionally, cells with >40% ribosomal protein gene reads were excluded. Batch correction quality was validated using the Local Inverse Simpson's Index, Adjusted Rand Index, and silhouette coefficient metrics. Real-time quantitative PCR and enzyme-linked immunosorbent assay (ELISA) quantified expression of four candidate RNT-relevant genes-MICA, MICB (NKG2D ligands; primary radionuclide targeting molecules), SUSD1 (immunosuppressive upregulator; potential RNT resistance mediator), and STAG3L1-in HeLa, SiHa, and normal HCerEpiC cell lines. Five independent biological replicates were performed per cell line, each with three technical replicates, following Minimum Information for Publication of Quantitative Real-Time PCR Experiments (MIQE) guidelines. Shapiro-Wilk normality testing and Levene's test for homogeneity of variance were applied prior to all parametric analyses.
    RESULTS: Cervical cancer scRNA-seq profiles revealed significantly depleted cluster of differentiation 8 (CD8)+ T cells (mean difference: -0.12; 95% CI: [-0.16, -0.08]; Cohen's d = 1.45) and natural killer (NK) cells (Cohen's d = 1.12), with increased CD25+ regulatory T cells (+0.08; 95% CI: [+0.05, +0.11]), establishing an RNT-unfavorable immunosuppressive TME. Comparative benchmarking against RNT-responsive tumor types, neuroendocrine tumors and prostate-specific membrane antigen (PSMA) positive prostate cancer, confirmed that cervical cancer exhibits a combination of reduced target surface density, depleted NKG2D-effector populations, and enriched immunosuppressive subsets collectively predictive of attenuated RNT efficacy. Experimental validation confirmed dramatic downregulation of MICA (HeLa: 0.44 ± 0.07 relative expression, p < 0.001, n = 5) and MICB (HeLa: 0.51 ± 0.09, p < 0.05), translating to markedly reduced MICA protein secretion (124.3 ± 18.5 pg/mL in HeLa versus 285.4 ± 31.2 pg/mL in controls, p < 0.01). Concurrently, SUSD1 was markedly upregulated (HeLa: 2.28 ± 0.25-fold; protein 3.42 ± 0.45 ng/mg, p < 0.001, n = 5). Strong mRNA-protein correlations, r = 0.78-0.92, p < 0.001; computed from five independent biological replicates per cell line; coefficient of variation (CV) < 15% for all measurements, validated transcriptomic profiling as a reliable proxy for theranostic target protein density estimation.
    CONCLUSIONS: This integrative study reveals that MICA/MICB downregulation and SUSD1 upregulation converge to suppress NKG2D-mediated antitumor immunity in cervical cancer, creating an immune-cold TME that limits current immunotherapy and radionuclide targeting efficacy. The NKG2D ligand expression landscape mapped here delineates a precision RNT strategy: scRNA-seq-guided patient stratification, radiolabeled anti-MICA/MICB nanobody theranostic imaging to confirm surface target density, and combination radioimmunotherapy integrating MICA/MICB re-expression induction with targeted radionuclide delivery to selectively irradiate the NKG2D-ligand-negative tumor cell population.
    Keywords:  MICA; MICB; NKG2D ligands; SUSD1; cervical cancer; immune escape; precision oncology; radioimmunotherapy; radionuclide therapy; single-cell RNA sequencing; theranostics
    DOI:  https://doi.org/10.1177/10849785261458459
  16. Biomed Pharmacother. 2026 Jun 08. pii: S0753-3322(26)00673-6. [Epub ahead of print]200 119637
      The prognosis for advanced synovial sarcoma remains poor, with limited therapeutic options. Recently, cloned T cell receptor (TCR)-engineered T cell therapy has shown promising results in patients with advanced synovial sarcoma; however, the number of patients eligible for this therapy is limited owing to human leukocyte antigen (HLA) restriction. To solve this problem, we focused on chimeric antigen receptor (CAR)-T cells that target ligands of NKG2D, an activating receptor of natural killer cells. Because NKG2D recognizes a family of eight ligands, we hypothesized that NKG2D-based CARs could function as an intrinsic multi-antigen targeting platform, potentially mitigating antigen heterogeneity and antigen escape, which are key barriers in CAR-T therapy for solid tumors. We first evaluated the surface expression of NKG2D ligands (NKG2DLs) in synovial sarcoma cell lines and examined their transcript levels in public bulk RNA-seq datasets from synovial sarcoma tissues. We then constructed NKG2D-based, 4-1BB-co-stimulated CAR-T cells. These CAR-T cells showed effector responses and antitumor effects against synovial sarcoma cells in vitro, as demonstrated by the results of the intracellular cytokine production, cytokine secretion, CD107a degranulation assay, WST-8 assay, and real-time cell analysis, and in vivo in an NSG mouse xenograft model of synovial sarcoma. Although further mechanistic, translational, and safety validation studies are required, these findings provide a preliminary disease-specific preclinical proof of concept for HLA-independent NKG2D-based CAR-T cell therapy in synovial sarcoma, particularly in patients who are ineligible for or have not responded to TCR-T therapy.
    Keywords:  CAR-T cell therapy; Chimeric antigen receptor; Immunotherapy; Natural killer group 2 member D; Synovial sarcoma
    DOI:  https://doi.org/10.1016/j.biopha.2026.119637
  17. Methods Cell Biol. 2026 ;pii: S0091-679X(26)00078-6. [Epub ahead of print]208 99-114
      Accurate assessment of cell viability is fundamental in biomedical research, with applications ranging from cancer biology to drug discovery. Traditional assays based on metabolic activity or membrane integrity are cost-effective but limited to endpoint measurements, often overlooking the dynamic nature of cell survival and death. Here, we present a workflow that combines live cell imaging with automated image analysis to provide continuous, unbiased quantification of cell viability. Using a fluorescent marker of membrane integrity and nuclear staining, time-lapse microscopy captures cell fate dynamics under diverse experimental conditions. Automated segmentation and classification, implemented through the open-source DIPlib library, enable reproducible distinction between viable and non-viable cells while minimizing observer bias. The method is scalable, adaptable to different imaging platforms and suitable for high-throughput applications.
    Keywords:  automated image analysis; cell viability quantification; live cell imaging; single cell analysis
    DOI:  https://doi.org/10.1016/bs.mcb.2026.02.010
  18. Sci Immunol. 2026 Jun 12. 11(120): eaea6909
      Cellular double-stranded RNA (dsRNA) can activate immune pathways similar to viral RNA. Adenosine deaminases acting on RNA 1 (ADAR1)-mediated adenosine-to-inosine (A-to-I) RNA editing has long been believed to destabilize endogenous dsRNA, thus preventing immune activation. We identified DEAD-box RNA helicase 6 (DDX6) as a potent editing repressor and an immune protector under normal conditions but as an immunosuppressor in cancer contexts. Through its interaction with ADAR1, DDX6 binds preferentially to cytoplasmic dsRNA, repressing editing of adenosines in A:C mismatches across the transcriptome, disrupting dsRNA structural stability, and suppressing interferon signaling and immune responses. Depleting DDX6 in tumor cells triggers dsRNA accumulation and activates both intrinsic and extrinsic immunity to hinder tumor growth. Our findings broaden our understanding of the paradigm that RNA editing not only destabilizes cellular dsRNAs but also can stabilize them through I-C pairing, a process preferentially suppressed by DDX6, to limit cytosolic dsRNA sensor recognition. Targeting DDX6 and harnessing RNA-associated tumor cell-intrinsic innate immune activation holds promise for cancer immunotherapy.
    DOI:  https://doi.org/10.1126/sciimmunol.aea6909