bims-unfpre Biomed News
on Unfolded protein response
Issue of 2026–04–12
ten papers selected by
Susan Logue, University of Manitoba



  1. FEBS J. 2026 Apr 08.
      Heavy metals like lead, cadmium, arsenic, mercury and chromium are persistent environmental contaminants recognised for their harmful effects on human health. Among their various toxicological effects, recent studies have identified endoplasmic reticulum (ER) as a critical target of HM-induced cellular damage. This review explores the contribution of HMs in disrupting ER homeostasis, with a particular focus on ER dysfunctions, ER stress mechanisms, calcium regulation, and ER-mitochondria crosstalk. ER stress occurs when its protein-folding capacity is exceeded, activating the unfolded protein response (UPR). Persistent ER stress, commonly induced by HM exposure, triggers apoptosis and contributes to several neurological diseases. A central aspect of HM-mediated ER dysfunctions involves the imbalance of ER Ca2+ homeostasis, which disrupts cellular signalling and promotes oxidative stress. Additionally, HMs impair ER-mitochondrial communication and energy metabolism, eventually amplifying apoptotic signals. This review systematically explores how HMs contribute to ER stress by altering molecular chaperone expression, Ca2+ handling, and inter-organelle crosstalk. Furthermore, it explores the therapeutic potential of selected bioactive compounds, which have shown promising effects in mitigating HM-induced ER dysfunction. These compounds exert protective actions by modulating ER stress signalling pathways. Collectively, this review highlights the need for further studies on treating damage caused by heavy metals. Understanding the interplay between ER dysfunctions and HM toxicity offers valuable insights into the development of new and more advanced therapeutic approaches for neurodegenerative and other chronic diseases linked to toxic HM exposure.
    Keywords:  bioactive compounds; endoplasmic reticulum calcium dyshomeostasis; endoplasmic reticulum stress; endoplasmic reticulum–mitochondria crosstalk; heavy metal toxicity
    DOI:  https://doi.org/10.1111/febs.70527
  2. bioRxiv. 2026 Apr 02. pii: 2026.03.30.715154. [Epub ahead of print]
      Endoplasmic reticulum (ER) stress in pancreatic beta cells contributes to impaired function and type 2 diabetes (T2D). In this study we performed genome-wide perturbation screens and genomic profiling in beta cells to identify novel mediators of ER stress responses and diabetes risk. We defined gene regulatory networks in beta cells and identified specific beta cell networks enriched for T2D risk variants with altered expression in ER stress. We performed a loss-of-function CRISPR screen for survival under ER stress in EndoC-βH1 cells, which identified 167 pro-survival and 47 pro-death genes involved in processes related to insulin secretion, mitochondrial transport and protein ubiquitination. Beta cell survival genes collectively had limited genomic change in stress yet showed significant, independent enrichment for T2D risk variants, including novel T2D candidate gene DTNB which we validated protects against beta cell death during stress. Overall, our results revealed mediators of ER stress responses in beta cells and identified new therapeutic targets to preserve beta cells in diabetes pathogenesis.
    DOI:  https://doi.org/10.64898/2026.03.30.715154
  3. Mediators Inflamm. 2026 ;2026(1): e4439938
      Endoplasmic reticulum stress (ER stress) is closely related to the pathogenesis of atherosclerosis through various mechanisms, including inflammatory responses and foam cell formation. However, the mechanisms by which ER stress contributes to atherosclerosis require further elucidation. In this study, we investigate the impact of the inositol-requiring enzyme 1 alpha (IRE1α) arm of the unfolded protein response (UPR) in the expression of inflammatory cytokines in monocytes and intracellular lipid accumulation in macrophages, which play a crucial role in the immune response associated with atherosclerosis. We created an IRE1α knockout (KO) THP-1 monocytic cell line using the CRISPR/Cas9 gene-editing technology and subsequently differentiated these cells into macrophages. We conducted a comparative analysis of IRE1α KO cells and control THP-1 cells, focusing on several parameters: morphological features, lipopolysaccharide (LPS)-induced proinflammatory cytokine responses, specifically interleukin-1 beta (IL-1β), interleukin-6 (IL-6), and tumor necrosis factor (TNF) α measured by quantitative real-time PCR (qPCR) and enzyme-linked immunosorbent assay (ELISA), as well as intracellular cholesterol accumulation and the expression levels of CD36 and ABCA1 genes following exposure to low-density lipoproteins (LDLs) derived from patients with atherosclerosis. Our findings demonstrate that IRE1α KO resulted in significant reduction of TNF, IL-1β, and IL-6 expression following LPS stimulation (p  < 0.05). ELISA confirmed significantly reduced cytokine secretion in IRE1α KO monocytes compared to controls. Furthermore, IRE1α deficiency impaired the cellular response to atherogenic LDL, preventing lipid-induced upregulation of scavenger receptor CD36 and cholesterol efflux transporter ABCA1. Thus, IRE1α serves as a critical regulator of both inflammatory cytokine expression and lipid metabolism in THP-1 cells, highlighting its potential as a therapeutic target for inflammatory diseases and atherosclerosis. Targeting IRE1α could offer new strategies to address inflammation and lipid dysregulation in cardiovascular diseases.
    Keywords:  CRISPR/Cas9; IRE1α; atherosclerosis; inflammation; macrophages; unfolded protein response
    DOI:  https://doi.org/10.1155/mi/4439938
  4. Trends Microbiol. 2026 Apr 08. pii: S0966-842X(26)00070-3. [Epub ahead of print]
      The unfolded protein response (UPR) is a central cellular stress pathway increasingly recognized as a target of microbial manipulation. While viral engagement of the UPR is well documented, far less is known about how bacterial pathogens, particularly extracellular ones, exploit this host stress machinery. Group A Streptococcus (GAS) is an exquisitely human-adapted pathogen capable of causing asymptomatic colonization as well as severe invasive diseases and provides a compelling example. GAS selectively activates the PKR-like endoplasmic reticulum kinase (PERK)-eukaryotic initiation factor 2 (eIF2α)-activating transcription factor 4 (ATF4) arm of the UPR, driving host asparagine (Asn) biosynthesis. The bacterium then imports this Asn to boost its metabolic activity, growth, and virulence, establishing a direct metabolic link between host ER stress and GAS pathogenicity. This Asn-driven regulatory circuit parallels the ATF4-Asn axis in cancer biology, where stress-induced Asn production supports metabolic adaptation, proliferation, and resistance to therapy. Together, these insights position Asn as a central metabolic signal at the intersection of host stress responses and GAS virulence.
    Keywords:  asparagine; cancer; endoplasmic reticulum stress; group A Streptococcus; streptolysin toxins (SLO, SLS); unfolded protein response
    DOI:  https://doi.org/10.1016/j.tim.2026.03.011
  5. Eur J Cell Biol. 2026 Mar 30. pii: S0171-9335(26)00007-5. [Epub ahead of print]105(3): 151536
      The endoplasmic reticulum (ER) is a central organelle for protein folding and redox regulation. Disulfide bond formation in the ER inevitably generates reactive oxygen species (ROS), creating a more oxidative environment than the cytosol. The transcription factor nuclear factor erythroid 2-related factor 2 (Nrf2) is a master regulator of antioxidant defense, yet its role in intracellular redox regulation and antioxidant pathway selectivity during ER stress remains incompletely characterized. Here, we investigated how Nrf2 modulates ROS levels under basal and ER stress conditions in HT22 mouse hippocampal cells. We found that Nrf2 attenuates hydrogen peroxide and superoxide accumulation under ER stress induced by thapsigargin or tunicamycin. Mechanistically, Nrf2 maintains redox balance through multiple pathways, including transcriptional induction of heme oxygenase-1 and preservation of glutathione and peroxiredoxin-4 levels. Furthermore, our results suggest that hydrogen peroxide functions not only as a cytotoxic molecule but also as a signaling mediator that sustains basal Keap1-Nrf2 pathway activity, thereby reinforcing redox homeostasis under both physiological and stress conditions. Among Keap1-Nrf2 target proteins, heme oxygenase-1 contributes to the regulation of mitochondrial superoxide levels. Together, these findings highlight the dual roles of hydrogen peroxide and Nrf2: limiting ROS-induced damage and orchestrating adaptive redox signaling in the ER. This study demonstrates the importance of Nrf2 in maintaining ER redox homeostasis and suggests its potential as a therapeutic target for diseases characterized by chronic ER stress, such as neurodegeneration.
    Keywords:  ER stress; Glutathione; HT22 cells; Hydrogen peroxide; Nrf2
    DOI:  https://doi.org/10.1016/j.ejcb.2026.151536
  6. bioRxiv. 2026 Apr 05. pii: 2026.04.01.715972. [Epub ahead of print]
      P-bodies are cytoplasmic membraneless organelles involved in mRNA storage, yet their role in cellular stress responses remains poorly understood. Here, we demonstrate that P-bodies are rapidly and selectively remodeled during the early response to endoplasmic reticulum (ER) stress in D. melanogaster oogenesis, positioning them as key early stress responders. Notably, this remodeling occurs within minutes of stress induction and precedes stress granule formation. This early remodeling is characterized by changes in P-body morphology and internal organization and promotes selective mRNA regulation. Specifically, ER stress leads to the recruitment and stabilization of maternal mRNAs and those encoding P-body components, while transcripts not associated with P-bodies are degraded. These observations indicate that P-body remodeling is not merely structural but functionally linked to the selective preservation of mRNA populations during stress. Mechanistically, we find that this process is driven by transcriptional upregulation of the RNA-binding protein, Bruno 1, downstream of ATF4-dependent stress signaling, thereby establishing a direct connection between the unfolded protein response and condensate regulation. Consistent with this model, loss of Bruno 1 abolishes, whereas its overexpression enhances P-body remodeling, demonstrating that stress-induced changes in RNA binding protein levels can actively reprogram condensate properties. Together, our findings reveal that P-bodies function as dynamic, stress-responsive hubs that integrate transcriptional signaling with post-transcriptional control, enabling the selective preservation of essential mRNAs during ER stress. More broadly, this work uncovers a previously unrecognized mechanism by which stress signaling pathways reorganize cytoplasmic architecture to shape mRNA fate.
    DOI:  https://doi.org/10.64898/2026.04.01.715972
  7. JCI Insight. 2026 Apr 08. pii: e197470. [Epub ahead of print]11(7):
      Ulcerative colitis (UC) remission is marked by gut microbiota restructuring, but how microbial metabolites influence immune-mediated tissue repair is unclear. Here, we demonstrate that oral vancomycin alleviates colitis symptoms in murine models, mirroring its clinical efficacy in inducing remission in patients with UC. Mechanistically, vancomycin's therapeutic effect is achieved by reducing deoxycholic acid (DCA). We reveal that DCA impairs mucosal repair driven by group 2 innate lymphoid cells (ILC2s) by inducing ER stress through direct binding to thioredoxin-related transmembrane protein 2 (TMX2). This interaction disrupts TMX2's role in protein folding, triggering unresolved unfolded protein response via hyperactivation of PERK/eIF2α signaling, which suppresses the production of pro-healing molecules by ILC2s. Pharmacological inhibition of PERK phosphorylation restores ILC2 function and accelerates colitis resolution. Our work uncovers a pathogenic microbiota/DCA/ILC2 axis that obstructs mucosal healing and positions vancomycin as a targeted strategy to eliminate DCA, thereby promoting UC remission.
    Keywords:  Gastroenterology; Immunology; Inflammatory bowel disease; Innate immunity; Protein misfolding
    DOI:  https://doi.org/10.1172/jci.insight.197470
  8. Front Mol Biosci. 2026 ;13 1751599
      The Transmembrane protein 45 (TMEM45) family comprises multi-pass transmembrane proteins that harbor the ancient DUF716 domain and are predominantly localized to the endomembrane system (endoplasmic reticulum, Golgi apparatus). In mammals, TMEM45 members exhibit highly tissue-specific expression patterns and their functions are tightly linked to endomembrane activities. TMEM45A directly binds prolyl-4-hydroxylase (P4HA1) to modulate extracellular matrix (ECM) synthesis, thereby contributing to fibrosis and corneal disorders. TMEM45B participates in the Golgi processing and trafficking of nociceptive signaling molecules and also influences viral replication. Another paralog, TEDDM1, is implicated in sperm maturation. Expression of TMEM45 proteins is stringently regulated by upstream signaling cascades including TGF-β1/Smad, hypoxia/HIF-1α, calcium signaling, and JAK2/STAT3. In turn, these proteins serve as regulatory nodes that modulate downstream pathways such as Jagged1/Notch, Rho/ROCK, unfolded protein response (UPR), NF-κB, AKT/mTOR, Wnt/β-catenin, DNA-damage repair, and apoptosis. This review integrates current knowledge on the tissue distribution and upstream/downstream signaling networks of TMEM45 proteins to clarify endomembrane protein function and provide new perspectives on intracellular signal transduction mechanisms.
    Keywords:  DUF716; ECM; TMEM45A; TMEM45B; endomembrane; endoplasmic reticulum
    DOI:  https://doi.org/10.3389/fmolb.2026.1751599
  9. bioRxiv. 2026 Apr 02. pii: 2026.03.31.715740. [Epub ahead of print]
      The neuronal endoplasmic reticulum (ER) extends from the soma into axons and dendrites to coordinate protein trafficking, lipid metabolism, inter-organelle organization, and calcium homeostasis. Conserved genes involved in shaping the tubular ER are implicated in neurodevelopment and neurodegeneration, suggesting that ER structure and dynamics influence neuronal health and drive pathogenesis. However, the links between ER morphology and neuronal function and resilience remain incompletely understood. While models typically depict the neuronal ER as a fully continuous network, here we show that micron-scale ER discontinuities in neurites are unexpectedly common in young, unstressed C. elegans . These discontinuities occur in both axonal and dendritic compartments with a consistent frequency that varies between motor and mechanosensory neuron types. Using live imaging and photokinetic assays of endogenously tagged markers of the ER, we confirm that these gaps reflect true loss of ultrastructural continuity. Subpopulations of ER tubule tips are highly motile, and the majority of ER discontinuities are resolved in less than an hour. Suggesting the formation of discontinuities is linked to cellular damage, their frequency increases with both age and environmental stress. Finally, in agreement with prior observations across models, discontinuities are exacerbated by impairment of certain ER shaping factors involved in hereditary spastic paraplegia, such as reticulon. These findings reveal a model where ER discontinuities are not uncommon in healthy animals, and provide a tractable system in C. elegans to dissect the molecular mechanisms maintaining ER structural homeostasis in vivo.
    DOI:  https://doi.org/10.64898/2026.03.31.715740
  10. bioRxiv. 2026 Mar 13. pii: 2026.03.12.711310. [Epub ahead of print]
      Mitochondrial dysfunction and extracellular protein aggregation occur in neurodegenerative diseases such as Alzheimer's disease (AD). However, it remains unclear if these processes are functionally linked. Here, we identify a signaling pathway that is activated upon accumulation of aggregation-prone proteins in the extracellular space. We find that the transcription factor ATFS-1, which regulates the mitochondrial unfolded protein response, also regulates transcripts required for endosomal recycling, multiple plasma membrane-localized signaling receptors, and secreted proteins that bind aggregation-prone proteins in the extracellular space, including transthyretin and Aβ, and promote their degradation. Interestingly, Aβ(1-42) aggregation induces atfs-1 -dependent transcription by promoting degradation of the bZIP protein ZIP-3, which antagonizes ATFS-1. ZIP-3 accumulates in the cytosol when it is phosphorylated by kinases that function downstream of plasma membrane-localized signaling receptors, including the WNT and glutamate receptors. Upon ligand binding, the signaling receptors stimulate the cognate kinase, many of which we found phosphorylate ZIP-3, impeding ZIP-3 degradation, allowing it to antagonize atfs-1 -dependent transcription. However, accumulation of aggregation-prone proteins such as Aβ(1-42) causes endosomal swelling, which impairs endosomal recycling, instead diverting signaling receptors to lysosomes for degradation. In turn, the depletion of signaling receptors reduces the level of ZIP-3 phosphorylation, resulting in ZIP-3 degradation and activation of atfs-1 -dependent transcription, which promotes extracellular proteostasis. Our findings uncover an unexpected coupling between endocytic quality control and mitochondrial signaling, revealing a circuit that preserves extracellular proteostasis and promotes organismal resilience.
    DOI:  https://doi.org/10.64898/2026.03.12.711310